Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30407
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   0.53 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   2.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.5  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 475 IVLQLLYLIAILQPYCGSVHRIKKY*SGW 389
           ++L +  +I +LQPY  +  RI  Y S W
Sbjct: 3   LLLAVATIITLLQPYDATPARIVCYFSNW 31


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 337 IKTYYSNFHSYTFNPYFSIPINIFLFYAQIRNKVA 441
           +  Y + + S   NPY SI +    FY+ + N  A
Sbjct: 7   VGVYGAPYPSTDQNPYPSIGVESSAFYSPLSNPYA 41


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +1

Query: 301 KFFILFCHDLK*IKTYYSNFHSYTFNPYFSIPINIFLFYAQIRNKVARWQSNIIIVVR 474
           K+FI+  + L  I T     H   FN Y     +IF F+A   + +A    NI+ V R
Sbjct: 42  KYFIIAIYVLT-ILTSSVTLH-VCFNSYMYAFTHIFFFFAICCDFIALIVVNIVHVFR 97


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 403  IFLFYAQIRNKVARWQSNIIIVV 471
            +FL   Q++     WQ  IIIV+
Sbjct: 1341 MFLVVGQLQASQIHWQKIIIIVM 1363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,428
Number of Sequences: 336
Number of extensions: 1975
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)