Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30406
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 325 2e-89
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 324 2e-89
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 324 3e-89
SB_56| Best HMM Match : Actin (HMM E-Value=0) 324 3e-89
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 324 3e-89
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 321 2e-88
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 226 7e-60
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_54| Best HMM Match : Actin (HMM E-Value=0) 136 1e-32
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 8e-13
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 68 5e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 5e-12
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 66 2e-11
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.004
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.32
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 2.3
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.0
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 3.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 4.0
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 28 4.0
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 5.3
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 5.3
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 6.9
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4) 27 9.2
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 325 bits (798), Expect = 2e-89
Identities = 153/163 (93%), Positives = 159/163 (97%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERF
Sbjct: 159 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERF 218
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 219 RCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 278
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 279 EISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 321
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 324 bits (797), Expect = 2e-89
Identities = 153/163 (93%), Positives = 159/163 (97%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+S+EKSYELPDGQVITIGNERF
Sbjct: 170 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERF 229
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEAL QPSFLGMES GIHET YNSIMKCDVDIRKDLYANTVMSGGTTMYPG+ADRMQK
Sbjct: 230 RCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQK 289
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EI+ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 290 EISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 332
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 324 bits (795), Expect = 3e-89
Identities = 152/163 (93%), Positives = 159/163 (97%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQK 316
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 317 EITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 324 bits (795), Expect = 3e-89
Identities = 152/163 (93%), Positives = 159/163 (97%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERF
Sbjct: 196 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERF 255
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQK
Sbjct: 256 RCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQK 315
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 316 EITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 358
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 324 bits (795), Expect = 3e-89
Identities = 152/163 (93%), Positives = 159/163 (97%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQK 316
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 317 EISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 321 bits (789), Expect = 2e-88
Identities = 152/163 (93%), Positives = 159/163 (97%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAAAS+SLEKSYELPDGQVITIGNERF
Sbjct: 196 RGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERF 255
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TM+PGIADRMQK
Sbjct: 256 RCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQK 315
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 316 EISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 358
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 226 bits (553), Expect = 7e-60
Identities = 102/128 (79%), Positives = 118/128 (92%)
Frame = +2
Query: 131 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 310
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 311 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 490
KDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 491 TFQQMWIS 514
TFQQMWI+
Sbjct: 125 TFQQMWIA 132
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 136 bits (329), Expect = 1e-32
Identities = 60/125 (48%), Positives = 84/125 (67%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY+F TA+ E VR +KEKLCYV + EQE A +T L + Y LPDG+V+ + ERF
Sbjct: 200 RGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERF 259
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
PEALFQP + +E G+ E ++N+I D+D R + Y + V+SGG+TMYPG+ R+++
Sbjct: 260 EAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLER 319
Query: 386 EITAL 400
EI L
Sbjct: 320 EIKQL 324
Score = 36.7 bits (81), Expect = 0.011
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 311 KDLYANTVMSGGTTMYPGIADRMQKEITA-LAPSTIKIKIIAPPERKYSVWIGGSILASL 487
K LY V+ G T+ Q +TA KI+I PP RK+ V++GG++LA +
Sbjct: 322 KQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADI 381
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 136 bits (328), Expect = 1e-32
Identities = 60/106 (56%), Positives = 79/106 (74%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSF +TAE++I+RD+KE LCY A+D+E+E+ A S E Y LPDGQ I IG+ERF
Sbjct: 2241 RGYSFQSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERF 2300
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 343
R E LFQPS LG + GIHE+++ SI KCD+D+R +L+ N V+SG
Sbjct: 2301 RAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 70.5 bits (165), Expect = 8e-13
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
Frame = +2
Query: 182 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 358
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 359 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILASLS 490
R+Q++I + P I+ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 491 TF 496
F
Sbjct: 316 EF 317
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 67.7 bits (158), Expect = 5e-12
Identities = 32/72 (44%), Positives = 47/72 (65%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RG++FT+++ +IV DIKEK+CY++ D +E+ + L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 206 RCPEALFQPSFL 241
E LF+P L
Sbjct: 887 SSMEPLFRPDLL 898
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 5e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +2
Query: 242 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 421
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 422 KII---APPERKYSVWIGGSILASL 487
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 121
RGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 75 RGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +2
Query: 248 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 412
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 413 --IK-IKIIAPP-ERKYSVWIGGSILASL 487
IK +K+ PP + W+GG+I SL
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSL 142
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +2
Query: 260 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 364
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 212 PEALFQPSFLGMESCGIHETV 274
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.32
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 256 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 435
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 436 PREEVLRMDRWIHPG 480
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 232 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 405
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 406 LDHQ 417
H+
Sbjct: 954 RKHE 957
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 459 GSVDPSWLPCPPSSRCG 509
G+ P W+ CPP S CG
Sbjct: 777 GASRPDWIECPPGSYCG 793
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 474 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 337
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +1
Query: 259 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 432
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 433 SPREEVLRMDRWIHP 477
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 326 NTVMSGGTTMYPGIADRMQKEITALAP 406
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +1
Query: 256 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 423
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 424 DHRSPREEVLRMDRWIH 474
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 211 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 390
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 391 HRPRALDHQ 417
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 4.0
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +1
Query: 253 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 426
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 427 -HRSPREEVLRMDRWIHPGFPVHLPADVD 510
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/70 (28%), Positives = 25/70 (35%)
Frame = +1
Query: 253 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 432
V H R V H + H V + V +RRQDA+ + QD DH
Sbjct: 634 VDHHRQDVDHHRQDADHHRQDVVHPRQDVVHRRQDADHRRQDADHHRQDVVHPRQDADHH 693
Query: 433 SPREEVLRMD 462
E R D
Sbjct: 694 RQDAEHHRQD 703
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +1
Query: 262 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 432
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 53 EREIVRDIKEKLCYVALDFEQEMATA---AASTSLEKSYELPD 172
E ++ +KE CYV+ F ++M A ++ + Y LPD
Sbjct: 392 ETFVINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 323 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 442
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +1
Query: 256 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 435
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 436 PREEVLRMDRWIH 474
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/73 (26%), Positives = 26/73 (35%)
Frame = +1
Query: 256 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 435
+H R R + RH + RH H R+ R E R+ H+ H
Sbjct: 73 QHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERSRHETRQHERS-RHKTSRHEK 131
Query: 436 PREEVLRMDRWIH 474
R E R +R H
Sbjct: 132 SRHETSRHERSRH 144
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 77 KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 217
+EK+ L+ E E A + LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +1
Query: 283 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 456
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 457 MDRWIHP 477
+R +HP
Sbjct: 214 EERGVHP 220
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +1
Query: 253 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 432
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 433 SPREE 447
R+E
Sbjct: 606 DQRDE 610
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +1
Query: 286 HEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 384
H R+H P R HR+ R + +P RY R+DA+
Sbjct: 307 HRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKDAK 343
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 217 GSLPAFLP-GYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDA 381
G++ +LP GI + + + H R+H P R HR+ R + +P RY R+ A
Sbjct: 185 GNMQRYLPESIGIPGNMQRYLTRIHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKHA 244
Query: 382 E 384
+
Sbjct: 245 K 245
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 323 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 442
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +1
Query: 244 YGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDH 393
Y +++PR R HH +H + H H +HH + Q H
Sbjct: 247 YHKLKNPRHRYHHHHHHHHQH--NHHQHHHHHHHHHHNHHHHHQQHHHHH 294
>SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4)
Length = 126
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 367 RRQDAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFP 486
RRQ HR R D +D+D R L DR+ + +P
Sbjct: 4 RRQGTATIHRYRQSDLRDRDRRRVLPRFLEQDRFDNSDYP 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,342,147
Number of Sequences: 59808
Number of extensions: 302114
Number of successful extensions: 1147
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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