Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30406
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 330 5e-91
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 330 5e-91
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 330 5e-91
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 330 5e-91
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 330 5e-91
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 330 5e-91
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 329 8e-91
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 329 8e-91
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 329 8e-91
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 323 5e-89
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 306 5e-84
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 159 8e-40
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 159 1e-39
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 112 1e-25
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 96 1e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 89 2e-18
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 73 9e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 73 9e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 2.6
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 6.0
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 8.0
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 330 bits (810), Expect = 5e-91
Identities = 155/163 (95%), Positives = 161/163 (98%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 317 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 330 bits (810), Expect = 5e-91
Identities = 155/163 (95%), Positives = 161/163 (98%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 317 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 330 bits (810), Expect = 5e-91
Identities = 155/163 (95%), Positives = 161/163 (98%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 317 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 330 bits (810), Expect = 5e-91
Identities = 155/163 (95%), Positives = 161/163 (98%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERF
Sbjct: 153 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 212
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 213 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 272
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 273 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 315
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 330 bits (810), Expect = 5e-91
Identities = 155/163 (95%), Positives = 161/163 (98%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERF
Sbjct: 183 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 242
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 243 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 302
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 303 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 345
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 330 bits (810), Expect = 5e-91
Identities = 155/163 (95%), Positives = 161/163 (98%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 317 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 329 bits (808), Expect = 8e-91
Identities = 154/163 (94%), Positives = 161/163 (98%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 317 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 329 bits (808), Expect = 8e-91
Identities = 154/163 (94%), Positives = 161/163 (98%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 317 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 329 bits (808), Expect = 8e-91
Identities = 154/163 (94%), Positives = 161/163 (98%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 317 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 323 bits (793), Expect = 5e-89
Identities = 153/163 (93%), Positives = 160/163 (98%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERF
Sbjct: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 317 EITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 358
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 306 bits (752), Expect = 5e-84
Identities = 143/163 (87%), Positives = 153/163 (93%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AA+S+SLEKSYELPDGQVITIGNERF
Sbjct: 196 RGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERF 255
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQK
Sbjct: 256 RCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQK 315
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 316 EIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 358
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 159 bits (387), Expect = 8e-40
Identities = 80/176 (45%), Positives = 109/176 (61%), Gaps = 13/176 (7%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY+F +A+ E VR +KEKLCY+A D EQE A +T L + Y LPDG+VI +G ERF
Sbjct: 200 RGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERF 259
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
PE LFQP + +E G+ E ++ I D+D R D Y + V+SGGTTMYPG+ R++K
Sbjct: 260 EAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEK 319
Query: 386 EITAL-----------APSTIKIKIIAPPERKYSVWIGGSILASL--STFQQMWIS 514
E+ L A KI+I APP RK+ V++GG++LA+L Q W+S
Sbjct: 320 ELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVS 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 159 bits (386), Expect = 1e-39
Identities = 79/161 (49%), Positives = 104/161 (64%)
Frame = +2
Query: 29 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFR 208
GY F + E EIVR++KE CY+ALD T + S++ SY LPD I I N FR
Sbjct: 201 GYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFR 255
Query: 209 CPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 388
PE LF+P +G E G+ V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E
Sbjct: 256 APEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGE 315
Query: 389 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 511
+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+
Sbjct: 316 MRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWL 356
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 112 bits (270), Expect = 1e-25
Identities = 55/164 (33%), Positives = 98/164 (59%), Gaps = 3/164 (1%)
Frame = +2
Query: 32 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNER 202
Y+F + E+ I+R E+ YV D+++E + T SL+ P Q I N R
Sbjct: 373 YAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSR 432
Query: 203 FRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 382
F C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA++++
Sbjct: 433 FLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLE 492
Query: 383 KEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
+E++ + P+TI ++ P R + ++G I+AS STF+ IS
Sbjct: 493 QELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCIS 536
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 96.3 bits (229), Expect = 1e-20
Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 8/127 (6%)
Frame = +2
Query: 158 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 322
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 323 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 493
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 494 FQQMWIS 514
FQQMW+S
Sbjct: 413 FQQMWVS 419
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 89.0 bits (211), Expect = 2e-18
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 25/185 (13%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDG-QVIT----- 187
R ++ E+ + IKEK CYV D +E T K DG IT
Sbjct: 218 REHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKY--DTDAAKWLRTYDGINSITKKPFN 275
Query: 188 --IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 358
+G ERF PE F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 359 PGIADRMQKEITALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLS 490
A ++Q+++ L+ P I +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 491 TFQQM 505
F Q+
Sbjct: 396 EFYQV 400
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 73.3 bits (172), Expect = 9e-14
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 22/147 (14%)
Frame = +2
Query: 53 EREIVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV-------- 181
E ++ + KE LC+V+ +F++ M A + K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 182 -----ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 346
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 347 TTMYPGIADRMQKEITALAPSTIKIKI 427
++ +PG +R+++E+ ++ P+ + +
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 73.3 bits (172), Expect = 9e-14
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 22/147 (14%)
Frame = +2
Query: 53 EREIVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV-------- 181
E ++ + KE LC+V+ +F++ M A + K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 182 -----ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 346
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 347 TTMYPGIADRMQKEITALAPSTIKIKI 427
++ +PG +R+++E+ ++ P+ + +
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNV 344
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Frame = +2
Query: 272 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 436
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 437 PERK----YSVWIGGSILASL 487
E K + W+G S+L SL
Sbjct: 254 SEIKNTPLFVSWLGASLLGSL 274
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 259 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 402
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 358 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 456
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = +1
Query: 283 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 462
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 463 RWIHPG 480
H G
Sbjct: 487 HGTHHG 492
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 400 RALDHQDQDHRSPREEVLRMDRW 468
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 400 RALDHQDQDHRSPREEVLRMDRW 468
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,892,533
Number of Sequences: 27780
Number of extensions: 205896
Number of successful extensions: 739
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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