Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30406
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             270   4e-75
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.087
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.46 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   1.4  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   3.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   4.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   10.0 
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   10.0 
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   10.0 
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   10.0 
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   10.0 
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   10.0 
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   10.0 
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   10.0 
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   10.0 

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  270 bits (663), Expect = 4e-75
 Identities = 126/133 (94%), Positives = 132/133 (99%)
 Frame = +2

Query: 116 EMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC 295
           EMATAA+S+SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME+CGIHET YNSIMKC
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60

Query: 296 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 475
           DVDIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE+KYSVWIGGSI
Sbjct: 61  DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSI 120

Query: 476 LASLSTFQQMWIS 514
           LASLSTFQQMWIS
Sbjct: 121 LASLSTFQQMWIS 133


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.5 bits (58), Expect = 0.087
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 319 VRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRM 459
           +++H H++ +HH    +    +  HRP     Q Q  +  R+E  R+
Sbjct: 138 LQRHHHLQNHHH--HLQSTAVQDHHRPYQQQQQQQQRQQQRQEERRL 182


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = +2

Query: 278 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 457
           N  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--I 396

Query: 458 WI 463
           WI
Sbjct: 397 WI 398


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +1

Query: 277 QLHHEVRRRHP*GPVRQHRH---VRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREE 447
           Q+HH++  +HP    +Q +H    +  H     +    +   + +A   Q Q    PR++
Sbjct: 167 QMHHQMHTQHPHMQPQQGQHQSQAQQQHLQAHEQHMMYQQQQQSQAASQQSQPGMHPRQQ 226


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = -1

Query: 309 RMSTSHFMMELYT--VSWMPHDSIPRKEGWKR 220
           R     F+  L T    W+ +++I RK  W R
Sbjct: 18  RSENDPFLKRLITGDEKWVVYNNIKRKRSWSR 49


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = -1

Query: 309 RMSTSHFMMELYT--VSWMPHDSIPRKEGWKR 220
           R     F+  L T    W+ +++I RK  W R
Sbjct: 139 RNENDPFLKRLITGDEKWVVYNNIKRKRSWSR 170


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 277 QLHHEVRRRHP*GPVRQHR 333
           QL+ +V+  H   PV+QHR
Sbjct: 266 QLNSDVQPGHGSPPVKQHR 284


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 292 LHDGVVHGLVDAARFHTQEG 233
           +H G +H  V   ++ TQ+G
Sbjct: 907 VHQGQIHLTVAVVQYKTQDG 926


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +1

Query: 433 SPREEVLRMDRWIHPGFPV 489
           +P  + + +  WIHP  P+
Sbjct: 531 NPLTDTVPIHTWIHPWLPL 549


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 349 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 465
           HH  R+R+  +E          Q++  R  RE +++ +R
Sbjct: 10  HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 110 RSRGRHSRASP*CHERFPSQR 48
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 349 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 465
           HH  R+R+  +E          Q++  R  RE +++ +R
Sbjct: 10  HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 110 RSRGRHSRASP*CHERFPSQR 48
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 349 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 465
           HH  R+R+  +E          Q++  R  RE +++ +R
Sbjct: 10  HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 110 RSRGRHSRASP*CHERFPSQR 48
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 349 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 465
           HH  R+R+  +E          Q++  R  RE +++ +R
Sbjct: 10  HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 349 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 465
           HH  R+R+  +E          Q++  R  RE +++ +R
Sbjct: 10  HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 349 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 465
           HH  R+R+  +E          Q++  R  RE +++ +R
Sbjct: 10  HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 110 RSRGRHSRASP*CHERFPSQR 48
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 349 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 465
           HH  R+R+  +E          Q++  R  RE +++ +R
Sbjct: 10  HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 110 RSRGRHSRASP*CHERFPSQR 48
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 349 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 465
           HH  R+R+  +E          Q++  R  RE +++ +R
Sbjct: 10  HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 110 RSRGRHSRASP*CHERFPSQR 48
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,361
Number of Sequences: 438
Number of extensions: 2658
Number of successful extensions: 23
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)