Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30406
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 301 2e-82
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 301 2e-82
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 298 2e-81
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 295 2e-80
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 293 5e-80
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 293 5e-80
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 289 7e-79
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 288 2e-78
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 284 2e-77
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 277 2e-75
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 251 2e-67
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 237 4e-63
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 147 4e-36
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 129 1e-30
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 97 8e-21
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 93 1e-19
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 89 1e-18
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 68 4e-12
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 65 3e-11
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 50 1e-06
At5g43500.2 68418.m05318 expressed protein 42 2e-04
At5g43500.1 68418.m05319 expressed protein 42 2e-04
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.049
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 1.4
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 1.9
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 4.3
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 5.7
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 5.7
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 5.7
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 5.7
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 7.5
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 7.5
At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel... 27 7.5
At2g06010.1 68415.m00657 expressed protein 27 7.5
At4g10290.1 68417.m01692 hypothetical protein 27 9.9
At3g50690.1 68416.m05546 leucine-rich repeat family protein 27 9.9
At3g04160.1 68416.m00440 expressed protein ; expression supporte... 27 9.9
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 301 bits (739), Expect = 2e-82
Identities = 136/163 (83%), Positives = 153/163 (93%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERF
Sbjct: 198 RGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERF 257
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM K
Sbjct: 258 RCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSK 317
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 301 bits (739), Expect = 2e-82
Identities = 136/163 (83%), Positives = 153/163 (93%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERF
Sbjct: 198 RGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERF 257
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM K
Sbjct: 258 RCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSK 317
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 298 bits (731), Expect = 2e-81
Identities = 136/163 (83%), Positives = 151/163 (92%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTT+AEREIVRD+KEKL Y+ALD+EQEM TA S+S+EKSYELPDGQVITIG ERF
Sbjct: 198 RGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERF 257
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM K
Sbjct: 258 RCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSK 317
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 295 bits (723), Expect = 2e-80
Identities = 136/163 (83%), Positives = 151/163 (92%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY FTTTAEREIVRDIKEKL YVALD+EQE+ TA +S+S+EK+YELPDGQVITIG ERF
Sbjct: 198 RGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERF 257
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM K
Sbjct: 258 RCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 317
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 293 bits (719), Expect = 5e-80
Identities = 135/163 (82%), Positives = 150/163 (92%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERF
Sbjct: 198 RGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERF 257
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM K
Sbjct: 258 RCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSK 317
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 293 bits (719), Expect = 5e-80
Identities = 135/163 (82%), Positives = 150/163 (92%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERF
Sbjct: 198 RGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERF 257
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM K
Sbjct: 258 RCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSK 317
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 289 bits (709), Expect = 7e-79
Identities = 133/163 (81%), Positives = 149/163 (91%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRD+KEKL Y+ALDFEQE+ T+ S+S+EKS+ELPDGQVITIG ERF
Sbjct: 198 RGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERF 257
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM K
Sbjct: 258 RCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSK 317
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 288 bits (706), Expect = 2e-78
Identities = 132/163 (80%), Positives = 149/163 (91%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ T+ S+S+EKS+ELPDGQVITIG ERF
Sbjct: 198 RGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERF 257
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM K
Sbjct: 258 RCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSK 317
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 284 bits (697), Expect = 2e-77
Identities = 132/162 (81%), Positives = 148/162 (91%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERF
Sbjct: 198 RGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERF 257
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM K
Sbjct: 258 RCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSK 317
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 511
EITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQ+ I
Sbjct: 318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKI 359
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 277 bits (680), Expect = 2e-75
Identities = 123/163 (75%), Positives = 146/163 (89%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY++TT+AEREIVRDIKEKLCY+A+D+EQEM A S++++++YELPDGQVITIG ERF
Sbjct: 199 RGYTYTTSAEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERF 258
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE LFQ S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM K
Sbjct: 259 RCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNK 318
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EI ALAP ++KIK++APPERKYSVW+GGSILASLS+F MWI+
Sbjct: 319 EINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWIT 361
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 251 bits (615), Expect = 2e-67
Identities = 116/163 (71%), Positives = 139/163 (85%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY T+AERE+VRDIKE+ Y+ALD+EQEM A S++++++YELPDGQVITIG ERF
Sbjct: 153 RGY---TSAEREVVRDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERF 209
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
RCPE LFQPS +GME+ GIHE YNSIMKCD DIRKDLY N V+SGGTTM+ GI +RM K
Sbjct: 210 RCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTK 269
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
EI ALA + ++IKI+APPERKYSVWIGGSILASLST++QMWI+
Sbjct: 270 EINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWIT 312
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 237 bits (579), Expect = 4e-63
Identities = 107/163 (65%), Positives = 130/163 (79%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY++TT+AEREIVRDIKEKLCYVALD+EQEM +++K+Y LPDGQ ITI ERF
Sbjct: 187 RGYTYTTSAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERF 246
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
CPE LFQPS +G ES GIHE NSI+KC VD R+D+Y N +M+GGTTM GI +RM K
Sbjct: 247 MCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTK 306
Query: 386 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
E+ AL PS++K+K++ PPE + SVWIGGSILASLSTF QMWI+
Sbjct: 307 ELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWIT 349
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 147 bits (356), Expect = 4e-36
Identities = 73/175 (41%), Positives = 112/175 (64%), Gaps = 12/175 (6%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 205
RGY+ TA+ E VR+IKEKLCY++ D+++E +T L K+Y LPDG+VI +G ERF
Sbjct: 197 RGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERF 256
Query: 206 RCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 385
+ PEALF P + +E G+ + V+ I + D+D R LY + V+SGG+TMYPG+ R++K
Sbjct: 257 QAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEK 316
Query: 386 EI------TALAPS-----TIKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWIS 514
EI T L + ++++I PP RK+ V++GG++LA + + WI+
Sbjct: 317 EIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWIN 371
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 129 bits (311), Expect = 1e-30
Identities = 71/180 (39%), Positives = 109/180 (60%), Gaps = 15/180 (8%)
Frame = +2
Query: 20 PXRGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNE 199
P S+ +R IV DIK+ +C V + + + T+ SYELPDGQ + IG +
Sbjct: 248 PDTTESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT---SYELPDGQTLEIGAD 304
Query: 200 RFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCDVDIRKDLYANTVMSG 343
RF+ P+ +F PS + GME G+ V SI KCDVDIR++LY++ +++G
Sbjct: 305 RFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIRRELYSSILLAG 364
Query: 344 GTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYSVWIGGSILASLSTFQQMWIS 514
GT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQMW S
Sbjct: 365 GTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFS 424
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 96.7 bits (230), Expect = 8e-21
Identities = 59/147 (40%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Frame = +2
Query: 65 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 244
V +KE+ A E E+A + + LPDGQVI+IG ER+ EALFQPS LG
Sbjct: 195 VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILG 251
Query: 245 MESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 424
+E GI E + I + + L NTV+ GGTT G R QKE L S I+
Sbjct: 252 LEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPT 310
Query: 425 IIAPPE------RKYSVWIGGSILASL 487
++ PPE YS W+GG+ILA +
Sbjct: 311 LVKPPEYMPENLGMYSAWVGGAILAKV 337
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 92.7 bits (220), Expect = 1e-19
Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 5/153 (3%)
Frame = +2
Query: 65 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 244
VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G
Sbjct: 309 VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAG 363
Query: 245 MESCGIHETVYNSIMKCD-VDIRKD--LYANTVMSGGTTMYPGIADRMQKEITALAPSTI 415
M + +H+ V + CD + D + V++GG+ PG+++R+++E+ PS+I
Sbjct: 364 MRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQDHLPSSI 423
Query: 416 K--IKIIAPPERKYSVWIGGSILASLSTFQQMW 508
I++I PP + W G ++++LS F W
Sbjct: 424 SNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPW 456
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 89.4 bits (212), Expect = 1e-18
Identities = 47/156 (30%), Positives = 82/156 (52%)
Frame = +2
Query: 47 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALF 226
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 227 QPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAP 406
QP+ LGM G+ E + +I C ++ LY + +++GG+T++P + +R++ E+ L P
Sbjct: 308 QPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVP 367
Query: 407 STIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 514
+KI + VW GGS+LAS F+ M ++
Sbjct: 368 DHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVT 403
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 35 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS-YELPDGQVITIG 193
S E +V D KEKLC+V+LD +++ A +L KS Y LPDG T G
Sbjct: 201 SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 67.7 bits (158), Expect = 4e-12
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Frame = +2
Query: 53 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP---DGQVITIGNERFRCPEAL 223
E E+ R + +L + F Q++ + TS E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 224 FQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTTMYPGIADRMQKEIT 394
F P+ +G++ G+ E SI + + ++ + L ++ +M+GG ++ PG+ +R++ I
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERLECGIR 662
Query: 395 ALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 496
+ P I ++ + W G S A+ F
Sbjct: 663 MIRPCGSPINVVRAMDPVLDAWRGASAFAANLNF 696
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 64.9 bits (151), Expect = 3e-11
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Frame = +2
Query: 26 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEM----ATAAASTSLEKSYELPDGQVIT-- 187
RG + ++ R +KE CY D +E A K + G T
Sbjct: 220 RGENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQWKGVKPKTGAPYTCD 279
Query: 188 IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 364
+G ERF PE F P + + + + I +D R+ LY N V+SGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 365 IADRMQKEITALAPS----------------TIKIKIIAPPERKYSVWIGGSILASLSTF 496
R+Q+++ + + +++ +++ P ++++VW GGS+L+S F
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEF 399
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +2
Query: 65 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 244
VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G
Sbjct: 309 VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAG 363
Query: 245 MESCGIHETVY 277
+ +H+ VY
Sbjct: 364 II---VHKLVY 371
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +2
Query: 248 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 424
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 425 II----APPERKYSVWIGGSILASLSTFQQMWI 511
+ + E ++ W GG+IL L ++ WI
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWI 550
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +2
Query: 248 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 424
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 425 II----APPERKYSVWIGGSILASLSTFQQMWI 511
+ + E ++ W GG+IL L ++ WI
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWI 562
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 34.3 bits (75), Expect = 0.049
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 260 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 439
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 440 ERKYS 454
+RK++
Sbjct: 393 DRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +2
Query: 260 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 439
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 440 ERKYS 454
ERK++
Sbjct: 394 ERKHA 398
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 56 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 151
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 375 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 220
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 429
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 429
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 297 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 163
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 376 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 489
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 332 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 430
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 332 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 430
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel,
putative (CNGC11) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 588
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 375 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 220
L+ + G+++ D+ +A YR L M Y++ W + + WKR
Sbjct: 496 LTEVEGFVISADDLKFVATQYRRLHSKQLQHMFRFYSLQWQTWAACFIQAAWKR 549
>At2g06010.1 68415.m00657 expressed protein
Length = 188
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 250 FHTQEGRLEESLGTTEPLVTDGDHL 176
F+ GRLE SL E +VT D+L
Sbjct: 164 FNMSSGRLEASLDRVEAIVTHSDYL 188
>At4g10290.1 68417.m01692 hypothetical protein
Length = 120
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 312 LRMSTSHFMMELYTVSWMPHDSIPRKEGWK 223
+R ++ + EL SW +S+PRK WK
Sbjct: 23 MRQTSDAKLAELGVTSWQLWESMPRKFPWK 52
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 370 RQDAEGDHRPRALDHQDQDHRSPREE 447
+ DAEG+ RP + D D++ EE
Sbjct: 153 KTDAEGNERPESDDEDDEEDEEDEEE 178
>At3g04160.1 68416.m00440 expressed protein ; expression supported
by MPSS
Length = 712
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 265 RDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPRE 444
RDR + H RR ++H + R R+ + D++ + D D+ + PR
Sbjct: 639 RDRRKDKHNDRRDDEFTRTKRHSIEGESYQNYRSSREKSSSDYKTKRDDPYDRRSQQPRN 698
Query: 445 EVLRMDRWI 471
+ L DR+I
Sbjct: 699 QNLFEDRYI 707
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,675,085
Number of Sequences: 28952
Number of extensions: 202220
Number of successful extensions: 782
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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