Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30405
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   3.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.6  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +2

Query: 50  VHLSKQKQTQDKMCDRKAVIKNADMSEEMQQD--AVDCATQALEKFNIEKDIA-AFIKKE 220
           + + KQK  +D   D+KA+ K     E+ ++D  +V   T  +E    + D +    + +
Sbjct: 69  IKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAK 128

Query: 221 FDKKYN 238
           F++  N
Sbjct: 129 FEELNN 134


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 251 CIVGRNFGSYVTHETRHFIYFYLGQ 325
           C+ G     + TH T H  Y Y G+
Sbjct: 70  CLNGATCQDHTTHYTCHCPYGYTGK 94


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 276 EPKLRPTMQCQVGLYFLSN 220
           EP LRP +  +  L+ L N
Sbjct: 107 EPNLRPKLLLKHNLFLLDN 125


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 410 WIAFADSHARL 442
           W  FADSH+ L
Sbjct: 220 WAGFADSHSPL 230


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 382 KKIEVMLNGLTALKEQYSHLSQVEVDEV 299
           KK++ +L+    L+  +  L+  E DEV
Sbjct: 177 KKVDDILSQAYKLEASFDDLATYETDEV 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,033
Number of Sequences: 336
Number of extensions: 2516
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)