Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30404
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    32   0.013
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.50 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   0.66 
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   1.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   1.5  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    24   3.5  
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          23   4.6  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   4.6  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   6.1  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.1  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    23   8.1  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 31.9 bits (69), Expect = 0.013
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 371 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHA 469
           P PL + E + C+QR+ A P+A R  IRR   A
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASRAVIRREERA 874


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 15/69 (21%), Positives = 32/69 (46%)
 Frame = -2

Query: 437  ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 258
            +LEEE   +   L+ ++++ EKA++     K +I  L  R            + +Q ++ 
Sbjct: 960  QLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTIET 1019

Query: 257  EVDRLEDEL 231
            ++   +D L
Sbjct: 1020 KLQETKDTL 1028


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.2 bits (55), Expect = 0.66
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
 Frame = -2

Query: 413 VGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSV-------QKLQKE 255
           +  N K +E  + +A +R+E+  + IKT    L+          + V        +LQ E
Sbjct: 427 IEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSE 486

Query: 254 VDRLEDEL-VAEKEKYKDIGDDLDTAFVELILKE*ASVIQRL 132
           +D + ++L  A+ +K++D         VEL   E   V  R+
Sbjct: 487 LDNVREQLGDAKIDKHEDARRKKKQEVVELFKLEVPGVYDRM 528


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 401 LKSLEVSEEKANQREEEYKNQIKTLTTRLK 312
           LKS +   +KA+QR +E K  IKT    +K
Sbjct: 219 LKSADGDVQKAHQRIDEGKRTIKTYEALVK 248


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
 Frame = -2

Query: 446 KIVELEEELRVVGNNLKSLEVSEEKANQREEE-----------YKNQIKTLTTRLKXXXX 300
           K+ ++ E LR + + LK+LE  +E+ ++ ++            Y+ ++K    +L+    
Sbjct: 185 KLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETELKETRKQLEELDG 244

Query: 299 XXXXXXRS----VQKLQKEVDRLEDELVAEKEKYKDI 201
                        Q++QK  DRL++   A K+  KD+
Sbjct: 245 QRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDV 281


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1

Query: 112 CQGTQTSSLCI 144
           CQGT  SSLCI
Sbjct: 249 CQGTNRSSLCI 259


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = -2

Query: 389 EVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLED 237
           ++ ++   Q E+E++    TL  +L              + LQK++D L D
Sbjct: 99  QLLDDAQRQMEQEHRQYAATLEEQLHAAQQETQQEQEMKKALQKQLDALTD 149


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 356 EEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEK--EKYK 207
           E++KN  +++ + L           + V+K+ K+VD L  +L+  K  + YK
Sbjct: 463 EKFKNICESIISELLPLQKPAVEVEKVVKKVSKDVDMLFGDLLKNKGAQNYK 514


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -3

Query: 385  SQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRS 251
            ++   PT      ++ S P PP+  R + +P SP       +RR+
Sbjct: 1088 NEAAEPTGEVEEEEV-SPPVPPIPPRSRRLPPSPRTTEMRRRRRN 1131


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -2

Query: 272  QKLQKEVDRLEDELVAEKEKYKDIGDD 192
            ++++KEVD  ED+   E+E+ ++  D+
Sbjct: 955  KEVKKEVDAAEDDEEEEEEEQEEEEDE 981


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 156 FLEDELYEGGIQIVSDV 206
           FL +  YEGGI IV+ +
Sbjct: 252 FLRECFYEGGISIVNSL 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,960
Number of Sequences: 2352
Number of extensions: 8126
Number of successful extensions: 33
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)