Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30404
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g47900.1 68414.m05334 expressed protein 33 0.086
At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyo... 33 0.11
At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyo... 33 0.11
At5g54480.1 68418.m06784 hypothetical protein 32 0.26
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 32 0.26
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 30 0.80
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 29 1.4
At4g33200.1 68417.m04727 myosin, putative similar to myosin (GI:... 29 1.9
At3g02930.1 68416.m00288 expressed protein ; expression support... 29 1.9
At3g43583.1 68416.m04636 hypothetical protein 29 2.5
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 28 3.2
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 28 3.2
At3g24390.1 68416.m03063 Ulp1 protease family protein contains P... 28 3.2
At3g02350.1 68416.m00218 glycosyl transferase family 8 protein c... 28 3.2
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 28 4.3
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 28 4.3
At1g68790.1 68414.m07863 expressed protein 28 4.3
At5g61560.1 68418.m07725 protein kinase family protein contains ... 27 5.7
At5g28490.1 68418.m03466 expressed protein contains Pfam profile... 27 5.7
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 27 5.7
At4g30710.2 68417.m04353 expressed protein contains Pfam domain,... 27 5.7
At4g30710.1 68417.m04352 expressed protein contains Pfam domain,... 27 5.7
At3g60380.1 68416.m06753 expressed protein 27 5.7
At5g65410.1 68418.m08226 zinc finger homeobox family protein / Z... 27 7.5
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 27 7.5
At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy... 27 7.5
At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 prot... 27 7.5
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 7.5
At1g68910.1 68414.m07886 expressed protein similar to Myosin hea... 27 7.5
At1g32530.1 68414.m04014 zinc finger (C3HC4-type RING finger) fa... 27 7.5
At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911... 27 7.5
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 27 7.5
At4g36120.1 68417.m05141 expressed protein 27 9.9
At4g24970.1 68417.m03578 ATP-binding region, ATPase-like domain-... 27 9.9
At3g55940.1 68416.m06216 phosphoinositide-specific phospholipase... 27 9.9
At3g48190.1 68416.m05257 ataxia-telangiectasia mutated protein (... 27 9.9
At3g25140.1 68416.m03139 glycosyl transferase family 8 protein c... 27 9.9
At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to... 27 9.9
At2g40320.1 68415.m04970 expressed protein and genefinder 27 9.9
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 27 9.9
At1g52410.2 68414.m05915 caldesmon-related weak similarity to Ca... 27 9.9
At1g27850.1 68414.m03413 expressed protein similar to En/Spm-lik... 27 9.9
At1g21810.1 68414.m02729 expressed protein 27 9.9
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 33.5 bits (73), Expect = 0.086
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -2
Query: 434 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKE 255
LEE+++ +K +V + + E Y+ Q+K ++ VQKL ++
Sbjct: 55 LEEQIKSYDVQIKGYDVQVKTYENQVESYEEQVKDFEEQIDAYDEKVHEYEEQVQKLNED 114
Query: 254 VDRLEDEL-VAEKE 216
V+ L ++L VA +E
Sbjct: 115 VEDLNEKLSVANEE 128
>At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/93 (19%), Positives = 39/93 (41%)
Frame = -2
Query: 446 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQK 267
K+V E+E++++ L +E E + E KNQ+ + + V +
Sbjct: 164 KLVAKEDEIKMLKARLYDMEKEHESLGKENESLKNQLSDSASEISNVKANEDEMVSKVSR 223
Query: 266 LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVEL 168
+ +E++ + KEK + + + D E+
Sbjct: 224 IGEELEESRAKTAHLKEKLESMEEAKDALEAEM 256
>At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/93 (19%), Positives = 39/93 (41%)
Frame = -2
Query: 446 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQK 267
K+V E+E++++ L +E E + E KNQ+ + + V +
Sbjct: 164 KLVAKEDEIKMLKARLYDMEKEHESLGKENESLKNQLSDSASEISNVKANEDEMVSKVSR 223
Query: 266 LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVEL 168
+ +E++ + KEK + + + D E+
Sbjct: 224 IGEELEESRAKTAHLKEKLESMEEAKDALEAEM 256
>At5g54480.1 68418.m06784 hypothetical protein
Length = 720
Score = 31.9 bits (69), Expect = 0.26
Identities = 24/97 (24%), Positives = 46/97 (47%)
Frame = -2
Query: 446 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQK 267
K++ + EE+R+ L +V EEK R E +++ T L+ S
Sbjct: 598 KVLSVVEEMRLRFQGLGFKQVEEEKQRMRTERLSKELEKKTKELEEIRGTRGSSPTS-NM 656
Query: 266 LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE 156
++ E+ L + + E EK++ + +L+ A V + L+E
Sbjct: 657 VEPELLFLRESVTQETEKHERLIRELNDA-VSMSLQE 692
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 31.9 bits (69), Expect = 0.26
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = -2
Query: 401 LKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAE 222
LK E EK +R+E N+++ + K ++ +++++ +LED+L +
Sbjct: 304 LKKFESVHEKHKKRQEVLDNELRACKEKFKEFERQDVKHREDLKHVKQKIKKLEDKLEKD 363
Query: 221 KEKYKDI 201
K D+
Sbjct: 364 SSKIGDM 370
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 30.3 bits (65), Expect = 0.80
Identities = 22/89 (24%), Positives = 40/89 (44%)
Frame = -2
Query: 434 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKE 255
+++EL V + LK V + + E +++T L+ +V L KE
Sbjct: 520 VKDELEGVTHELKESSVKNQSLQKELVEIYKKVETSNKELEEEKK-------TVLSLNKE 572
Query: 254 VDRLEDELVAEKEKYKDIGDDLDTAFVEL 168
V +E +++ E+E K + DL+ A L
Sbjct: 573 VKGMEKQILMEREARKSLETDLEEAVKSL 601
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 29.5 bits (63), Expect = 1.4
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = -2
Query: 434 LEEELRVVGN-NLKSL--EVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKL 264
+EE++R+ N ++SL E+SEEK + E + + TL RL+ S +
Sbjct: 1026 VEEKIRLYKNIQIESLSKEMSEEK--KELESCRLECVTLADRLRCSEENAKQDKESSLEK 1083
Query: 263 QKEVDRLEDEL----VAEKEKYKDIGDDLD 186
E+DRL DEL K+ + + D+D
Sbjct: 1084 SLEIDRLGDELRSADAVSKQSQEVLKSDID 1113
>At4g33200.1 68417.m04727 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]
Length = 1522
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -2
Query: 443 IVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKL 264
+VEL+++ ++ N++ SLE + K +LK SVQ L
Sbjct: 980 MVELKKDNALLKNSMNSLEKKNRVLEKELLNAKTNCNNTLQKLKEAEKRCSELQTSVQSL 1039
Query: 263 QKEVDRLEDE 234
++++ LE+E
Sbjct: 1040 EEKLSHLENE 1049
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -2
Query: 398 KSLEVSEEKANQREEE---YKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELV 228
+ L ++EE++++ E+E KN+++T+ SVQ+L +E ++ EL
Sbjct: 383 QKLGIAEEESSKSEKEAEKLKNELETVNEEKTQALKKEQDATSSVQRLLEEKKKILSELE 442
Query: 227 AEKEK 213
+ KE+
Sbjct: 443 SSKEE 447
>At3g43583.1 68416.m04636 hypothetical protein
Length = 100
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 425 PPQAQRFWIRRTRHAPRRAPSQPQPWPAYE 514
PP + F R+ H P P P+P P+ E
Sbjct: 7 PPHCRGFHCHRSNHRPPEKPPSPEPPPSPE 36
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 28.3 bits (60), Expect = 3.2
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = -2
Query: 446 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQK 267
++ ++EE+L V+ LEV + + +Q++ L L RS +
Sbjct: 694 QLCKVEEKLGVLEKKYTELEVRYTDLQRDNKLKSHQVEELQVSLAAEKQESANYKRSTES 753
Query: 266 ----LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE*ASVIQRLE 129
LQK V L +E + K +Y+D D + VE+ + + +I+ LE
Sbjct: 754 RLADLQKNVSFLREECRSRKREYEDELDRVVNKQVEIFILQ--KLIEDLE 801
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -2
Query: 437 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 258
+L+E+++ + +E S K YKN+ +L T L+ + KL+
Sbjct: 429 DLDEQIKRFKDRQGEIETSSSK-------YKNETTSLKTELRALQEKHVNAREASAKLKT 481
Query: 257 EVDRLEDELV-AEKEKYKDIGDDLDTAFVE 171
+ LED+L E+Y++ D T VE
Sbjct: 482 RIAELEDQLSDLTAERYENERDSRLTQAVE 511
>At3g24390.1 68416.m03063 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At4g05280,
At1g25886, At4g03300
Length = 1139
Score = 28.3 bits (60), Expect = 3.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 413 RHGAPPQAQRFWIRRTRHAPRRAPSQP 493
+ PPQ + +++R R+AP +P +P
Sbjct: 407 KQSRPPQLEETYVKRKRNAPGPSPKEP 433
>At3g02350.1 68416.m00218 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 561
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 1 FENKYHHVCMDFHNLKVRNTKY 66
FEN+ + D HNLK +N KY
Sbjct: 340 FENQAENATKDSHNLKFKNPKY 361
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/86 (22%), Positives = 37/86 (43%)
Frame = -2
Query: 437 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 258
E+EE R ++ EE+A +REE + + + R + +K ++
Sbjct: 431 EIEERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREE 490
Query: 257 EVDRLEDELVAEKEKYKDIGDDLDTA 180
E R E+E +E+ K ++ + A
Sbjct: 491 ERKREEEEAKRREEERKKREEEAEQA 516
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator of
chromosome condensation (RCC1) family protein similar to
zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = -2
Query: 446 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQK 267
K +LEEEL LK + + K I++LTT+LK S+
Sbjct: 859 KAHQLEEELEKTKRQLKVVTAMAADEAEENRSAKEVIRSLTTQLK-EMAEKQSQKDSIST 917
Query: 266 LQKEVDRLEDELVAE 222
K D+ + E V +
Sbjct: 918 NSKHTDKEKSETVTQ 932
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.9 bits (59), Expect = 4.3
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = -2
Query: 446 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQK 267
K E+E+ + + + L E ++EE K + K L RLK +K
Sbjct: 385 KKAEIEQLQVEISHKEEKLAKREAALEKKEEGVKKKEKDLDARLKTVKEKEKALKAEEKK 444
Query: 266 LQKEVDR-LEDE--LVAEKEKYKDIGDD 192
L E +R LED+ L K++ ++IG +
Sbjct: 445 LHMENERLLEDKECLRKLKDEIEEIGTE 472
>At5g61560.1 68418.m07725 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 796
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = -2
Query: 446 KIVELEEELRVVGNNLKSLEVSEEKANQ-------REEEYKNQIKTLTTRLKXXXXXXXX 288
K+ +L + LK+L + EE+A++ R+E+ +N+ + + ++
Sbjct: 326 KMQDLNQRRSEEATRLKNLTIREEEADEVVEMERERQEDAENEAELVRECIERETEERLE 385
Query: 287 XXRSVQKLQKEVDRLEDEL 231
++++KE RLED L
Sbjct: 386 AEARAEEVRKEKQRLEDAL 404
>At5g28490.1 68418.m03466 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 190
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 353 PLRVGWPS-PLRLPEISGCYQRHGAPPQAQRFWIRRTR 463
PLR W S + + Y+ +G PP+A F R R
Sbjct: 93 PLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVR 130
>At5g07660.1 68418.m00877 structural maintenance of chromosomes
(SMC) family protein similar to SMC-like protein (MIM)
[Arabidopsis thaliana] GI:5880614; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain
Length = 1058
Score = 27.5 bits (58), Expect = 5.7
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = -2
Query: 437 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 258
E+EE+ ++ SL+ +E KAN+ + Y+N ++ ++ +++K +
Sbjct: 729 EIEEKESLLEKLQDSLKEAELKANELKASYENLYESAKGEIE-----------ALEKAED 777
Query: 257 EVDRLEDEL---VAEKEKYKDIGDD 192
E+ EDEL EK Y+DI D
Sbjct: 778 ELKEKEDELHSAETEKNHYEDIMKD 802
>At4g30710.2 68417.m04353 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 373 RPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRSIGLKTNLSPKRRNT-RTSE 197
RPT + S + +K + R+ P SP+ P + SI L S +R +T R E
Sbjct: 54 RPTVSSSSQSVAAKRAVSAERKRPSTPPSPTSPSTPIRDLSIDLPA--SSRRLSTGRLPE 111
Query: 196 TIW 188
++W
Sbjct: 112 SLW 114
>At4g30710.1 68417.m04352 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 373 RPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRSIGLKTNLSPKRRNT-RTSE 197
RPT + S + +K + R+ P SP+ P + SI L S +R +T R E
Sbjct: 54 RPTVSSSSQSVAAKRAVSAERKRPSTPPSPTSPSTPIRDLSIDLPA--SSRRLSTGRLPE 111
Query: 196 TIW 188
++W
Sbjct: 112 SLW 114
>At3g60380.1 68416.m06753 expressed protein
Length = 743
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 361 AKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRSIGLKTNLSPKR 218
+++S+ S PS P L P SP + + +RRS L T+ +P+R
Sbjct: 331 SRQSSSRSSSPSLPPSPSLSPSPPSPELVPNDTRRRSPELVTDDTPRR 378
>At5g65410.1 68418.m08226 zinc finger homeobox family protein /
ZF-HD homeobox family protein similar to hypothetical
proteins (GP|4220524)(GP|3184285|)(Arabidopsis); ZP-HD
homeobox family protein GP|13374061 (Flaveria
bidentis);GP:5091602 {Oryza sativa}
Length = 279
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 359 RVGWPSPLRLPEISGCY-QRHGAPPQAQRFWIRRTRHAPRRAPS 487
R+GW + E+ + Q G P Q + W+ +H ++PS
Sbjct: 212 RIGWRIQRQDDEVIQRFCQETGVPRQVLKVWLHNNKHTLGKSPS 255
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 251 DRLEDELVAEKEKYKDIGDDLDTAF 177
D LEDE +A++ D+ DD++ AF
Sbjct: 7 DDLEDEYMADEYDMDDLEDDMNAAF 31
>At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85
hypothetical protein F9F8.14 - Arabidopsis thaliana,
EMBL:AC009991
Length = 355
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 225 GDKFVFKPIDLLLQF-LHGTLGELGTCFSLL 314
G +FVFKP+ +L+F HG G C LL
Sbjct: 259 GVRFVFKPVLKMLRFTYHGGAGRNRNCHFLL 289
>At3g44050.1 68416.m04718 kinesin motor protein-related KLP2
protein, Xenopus laevis, PIR:T30335
Length = 1229
Score = 27.1 bits (57), Expect = 7.5
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = -2
Query: 272 QKLQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE*ASVIQRLEV*VPWQHHQPAI 93
++LQK VD L +EL + +GDD D V+ +++ A V QR + H+ AI
Sbjct: 684 ERLQKLVDNLSNELEGKIRSSGMVGDD-DQMEVKTMVQAIACVSQR-----EAEAHETAI 737
Query: 92 QYSNIDSNL 66
+ S + +L
Sbjct: 738 KLSKENDDL 746
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.1 bits (57), Expect = 7.5
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = -2
Query: 437 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 258
+LEE G + V E+ +REE+ K +I+ L K + + L+K
Sbjct: 1488 QLEEAKEEAGKRTTTDAVVEQSVKEREEKEK-RIQILD---KYVHQLKDEVRKKTEDLKK 1543
Query: 257 EVDRLEDELVAEKEKYKDIGDDL 189
+ + L E K K++GD L
Sbjct: 1544 KDEELTKERSERKSVEKEVGDSL 1566
>At1g68910.1 68414.m07886 expressed protein similar to Myosin heavy
chain, nonmuscle type B (Cellular myosin heavy chain,
type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B)
(Swiss-Prot:Q27991) [Bos taurus]; contains 1
transmembrane domain
Length = 627
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = -2
Query: 437 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 258
EL +++ + KSLE + AN +E Y +I TTR K +++Q+
Sbjct: 473 ELNKDVSFLRQKAKSLEAMLDLANNEKERYAQEI---TTRNKVLMDMMLQLSSERERIQE 529
Query: 257 EVDRLEDE 234
++ L E
Sbjct: 530 QLYSLAKE 537
>At1g32530.1 68414.m04014 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger); weak similarity to
interaptin (GI:3549261) [Dictyostelium discoideum] weak
similarity to Axoneme-associated protein mst101(2)
(Swiss-Prot:Q08696) [Drosophila hydei]
Length = 711
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 263 QKEVDRLEDELVAEKEKYK 207
+K++ +L+DE+ AEKEK K
Sbjct: 505 EKQILKLQDEITAEKEKIK 523
>At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911:
Plant protein of unknown function (DUF869)
Length = 982
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = -2
Query: 437 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 258
+L+E +++ LE S +K+N E Q+K + + + L+
Sbjct: 758 KLQETEKLLAEVKSDLE-SAQKSNGMGE---TQLKCMVESYRSLETRSSELEIELTSLKG 813
Query: 257 EVDRLEDELVAEKEKYKD 204
+++ LEDEL EKE +++
Sbjct: 814 KIENLEDELHDEKENHRE 831
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 27.1 bits (57), Expect = 7.5
Identities = 17/95 (17%), Positives = 46/95 (48%)
Frame = -2
Query: 440 VELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQ 261
VE++ + +++ ++ N++E + + ++KT+ R K +Q +
Sbjct: 416 VEIDHSEEKLEKRNQAMNKKFDRVNEKEMDLEAKLKTIKEREKI-----------IQAEE 464
Query: 260 KEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE 156
K + + +L+++KE +D+ +++ E+ KE
Sbjct: 465 KRLSLEKQQLLSDKESLEDLQQEIEKIRAEMTKKE 499
>At4g36120.1 68417.m05141 expressed protein
Length = 981
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = -2
Query: 434 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKE 255
LEE+ +++ + LKS S E E Q+K +T K V+ L++E
Sbjct: 775 LEEKEQLI-SKLKSQLTSSEDLQSLAE---TQLKCVTESYKSLDLHAKELEAKVKSLEEE 830
Query: 254 VDRLEDELVAEKEKYKD 204
RLE EK +++
Sbjct: 831 TKRLEMAFTTEKHGHEE 847
>At4g24970.1 68417.m03578 ATP-binding region, ATPase-like
domain-containing protein low similarity to microrchidia
[Mus musculus] GI:5410255; contains Pfam profile
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein
Length = 707
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 434 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTL 327
L+EELR K+LEV + + Q+ EE K + + L
Sbjct: 623 LQEELRREKERRKALEVEVQLSRQKIEEMKKEQENL 658
>At3g55940.1 68416.m06216 phosphoinositide-specific phospholipase C,
putative similar to phosphoinositide specific
phospholipase C GI:857374 from [Arabidopsis thaliana]
Length = 584
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 434 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTR 318
+ E L+V + ++ L +SEE+ + E+Y QI T R
Sbjct: 337 ITECLKVDPDKVRRLSLSEEQLEKASEKYAKQIVRFTQR 375
>At3g48190.1 68416.m05257 ataxia-telangiectasia mutated protein (Atm)
identical to ataxia-telangiectasia mutated protein (Atm)
[Arabidopsis thaliana] GI:7529272; contains Pfam profile
PF00855: PWWP domain; contains GA donor splice site at
exon 73
Length = 3255
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 16 HHVCMDFHNLKVRNTKYKLESMFEY*IAG*WCCQGTQTSSLCITEAYSLRMSSTKAVSRS 195
H V + N + N + K E+ Y + G W + ++S I E Y LR + + A +S
Sbjct: 3130 HEVSISLANYILHNYQLKEEASDIYRVIGKWLAETRSSNSRTILEKY-LRPAVSLAEEQS 3188
Query: 196 S 198
S
Sbjct: 3189 S 3189
>At3g25140.1 68416.m03139 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 559
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 1 FENKYHHVCMDFHNLKVRNTKY 66
FENK + D N+K RN KY
Sbjct: 338 FENKLENATKDTTNMKFRNPKY 359
>At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to
homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis
thaliana]
Length = 723
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -2
Query: 278 SVQKL--QKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE 156
S++K+ +KE++R E++ K K +D+ LDT E L E
Sbjct: 210 SLEKIRPEKELERATKEILRRKLKIRDLFQHLDTLCAEGSLPE 252
>At2g40320.1 68415.m04970 expressed protein and genefinder
Length = 425
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 353 PLRVGWPSPLRLPEISGCYQRHGAPPQAQRFWIRRTRH 466
PL W P P+++ C Q HG P + +FW + H
Sbjct: 96 PLYEEWECPYIQPQLT-C-QEHGRPDKDYQFWRWQPNH 131
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/49 (20%), Positives = 27/49 (55%)
Frame = -2
Query: 353 EYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEKEKYK 207
E +NQ+++L LK +++L+ +++ LE+E+ + + ++
Sbjct: 537 ELENQVESLEAELKKQSEEFSESLCRIKELESQMETLEEEMEKQAQVFE 585
>At1g52410.2 68414.m05915 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 759
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -2
Query: 437 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 258
E+E E L+ L S+ A+ EEE+ + ++L L+ S+++LQ
Sbjct: 264 EIEREFEAASKGLEQLRASDSTADNNEEEHAAKGQSL---LEEIEREFEAATESLKQLQV 320
Query: 257 EVDRLEDELVAEKEKYKDIGDDLDTAF 177
+ D ED+ K + + ++++ F
Sbjct: 321 D-DSTEDKEHFTAAKRQSLLEEIEREF 346
>At1g27850.1 68414.m03413 expressed protein similar to En/Spm-like
transposon protein GB:AAB95292 GI:2088658 from
[Arabidopsis thaliana]
Length = 1148
Score = 26.6 bits (56), Expect = 9.9
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = -3
Query: 379 RRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPS-----VPCRNCKRRSIGLKTNLSPKRR 215
R RP++A+ + + S RR+ P PS P +R S G T SP R
Sbjct: 167 RGRPSSARHPSPASGRRSGTPVRRISPTPGKPSGPVSRSPTPTSRRMSTGSTTMASPAVR 226
Query: 214 NT 209
T
Sbjct: 227 GT 228
>At1g21810.1 68414.m02729 expressed protein
Length = 628
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/92 (22%), Positives = 40/92 (43%)
Frame = -2
Query: 446 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQK 267
K + LE+ + + LK E + R+E+ KN +T K + V +
Sbjct: 53 KNIVLEDRVSHLDGALK--ECVRQLRQFRDEQEKNIQAAVTESTKELHSANTGLEKRVLE 110
Query: 266 LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVE 171
LQKE + + E + + ++ +DL+ +E
Sbjct: 111 LQKEAEAAKSENMMLRREFLTQREDLEIVMIE 142
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,904,964
Number of Sequences: 28952
Number of extensions: 202564
Number of successful extensions: 819
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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