Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30397
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   3.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.6  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 267 STINLTKEKFEVILDVQQFTPDEITV 344
           S INL KE+F+ +  +Q+    E+ V
Sbjct: 31  SDINLIKEEFDELGRLQRICNGEVAV 56


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 459 VNDLVSTLSSDGVLTVTAP 515
           VN+ V   S + VLTVTAP
Sbjct: 309 VNNSVGGESVETVLTVTAP 327


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/53 (20%), Positives = 25/53 (47%)
 Frame = +3

Query: 276 NLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRR 434
           ++ K+ +  + D+++  P    + +      V G+ EEK  ++  +    TRR
Sbjct: 80  DVIKDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTRR 132


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 397  TSTASFPVSSPAGTSCRPDTRSTTWSARCLPTACSP 504
            TS ++    +P  T+  P+ + T W     PT+  P
Sbjct: 1350 TSVSTTTSWNPGSTTNYPEWQPTEWHPPIPPTSEKP 1385



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +1

Query: 427  PAGTSCRPDTRST 465
            P  T C PD  ST
Sbjct: 2279 PENTECHPDASST 2291


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +3

Query: 90  WWDDWE 107
           WWDD+E
Sbjct: 214 WWDDYE 219



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 195 GMN*WRITGRPSSDPCR 145
           G   WR TG  + DP R
Sbjct: 510 GFGRWRETGEAACDPYR 526


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 353 EQHGCRRRQARGETGRARL 409
           E+H  RR  +RG   RA++
Sbjct: 264 EEHDTRRASSRGIIPRAKI 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,030
Number of Sequences: 336
Number of extensions: 1895
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)