Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30397
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0227 + 1933247-1933699 38 0.005
01_01_0229 - 1943473-1943922 35 0.034
09_04_0075 - 14340458-14340551,14340643-14340814,14340895-143410... 32 0.24
06_01_0814 - 6163155-6163591,6163729-6164038 32 0.24
01_01_0599 - 4448290-4448790 32 0.24
11_02_0041 - 7669692-7670312 31 0.73
08_01_0838 - 8185083-8185910 29 1.7
01_06_1448 - 37434159-37434242,37434875-37434968,37435077-374352... 29 1.7
07_01_0383 - 2856777-2858042,2858238-2858270,2858607-2858742,286... 29 2.2
06_03_0615 - 22761375-22761760,22762218-22765026 29 2.2
05_03_0323 - 12424243-12424776 29 2.2
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 29 2.9
03_06_0568 - 34778408-34778710,34779340-34779411,34779549-347796... 29 2.9
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 29 2.9
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 28 3.9
01_01_0228 + 1940149-1940649 28 5.1
09_03_0205 - 13483981-13484291,13484402-13484531,13484742-13484939 27 6.8
07_03_0316 + 16684100-16684339,16684425-16685132,16685241-166859... 27 6.8
12_02_0398 - 18586985-18587480,18587669-18587687,18588317-185885... 27 8.9
08_02_0679 + 20006105-20006488,20006615-20006848,20007929-20008138 27 8.9
03_01_0038 - 340564-341108,341214-341463,341546-341649,341728-34... 27 8.9
02_04_0550 - 23795957-23796154,23796596-23796650,23797324-237973... 27 8.9
02_04_0538 + 23739830-23740126,23740205-23740261,23740344-237404... 27 8.9
>01_01_0227 + 1933247-1933699
Length = 150
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +3
Query: 369 VEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAP 515
V+GK++E+ S +F RR+ LP G V D VS +GVLTVT P
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARV-DQVSASMDNGVLTVTVP 134
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.034
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = +3
Query: 282 TKEKFEVILDVQQFTPDEITVKASN-NTVVVEGKH----EEKQDEHGFISR---QFTRRY 437
T E D+ +E+ V+ N +V+ G+ E+K D+ + R QF RR+
Sbjct: 49 TPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRF 108
Query: 438 ILPTGYEVNDLVSTLSSDGVLTVTAP 515
LP +V D V +GVLTVT P
Sbjct: 109 RLPENAKV-DQVKASMENGVLTVTVP 133
>09_04_0075 -
14340458-14340551,14340643-14340814,14340895-14341066,
14341617-14341811,14341886-14342053,14342150-14342335,
14342797-14342881,14342896-14343206,14344222-14344569
Length = 576
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 381 HEEKQDEHGFISRQFTRRYILPTGYEVND 467
H + H FI+ Q + Y LP GYE+ND
Sbjct: 157 HSLEAGHHVFINLQTEKAYCLPDGYEIND 185
>06_01_0814 - 6163155-6163591,6163729-6164038
Length = 248
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 330 DEITVKASNNTVVVEGKHE-EKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTV 506
+ + V A N++V++G+ E + +D+ ++TRR LP D + +GVL V
Sbjct: 170 EHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRV 229
Query: 507 TAP 515
P
Sbjct: 230 AVP 232
>01_01_0599 - 4448290-4448790
Length = 166
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 375 GKHEEKQDEHGFISRQ-----FTRRYILPTGYEVNDLVSTLSSDGVLTVT 509
G EEK++ ++ + F R+++LP +V D +S + DGVLTVT
Sbjct: 98 GGEEEKEESCKYLRMERRMGKFMRKFVLPDNADV-DKISAVCQDGVLTVT 146
>11_02_0041 - 7669692-7670312
Length = 206
Score = 30.7 bits (66), Expect = 0.73
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 420 QFTRRYILPTGYEVNDLVSTLSSDGVLTVTAP 515
+F RR+ +P G +V + + L DGVLTVT P
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP 171
>08_01_0838 - 8185083-8185910
Length = 275
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 369 VEGKHEEKQDEHGFISRQFTRRYILPTGYE 458
++ EE+ EH + R+FT +YI+ +GY+
Sbjct: 194 IKKAEEEESLEHNELWREFTDKYIIASGYD 223
>01_06_1448 -
37434159-37434242,37434875-37434968,37435077-37435250,
37435536-37435627,37435947-37436056,37437274-37437349,
37437445-37437537,37437617-37437817
Length = 307
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 410 HFPSVHPPVHPADRIRGQRPGQHVVFRRRAHRHG 511
HF S++P V A +RP + VV + H HG
Sbjct: 91 HFTSLYPQVSEATVTIAERPWERVVVDGKPHSHG 124
>07_01_0383 -
2856777-2858042,2858238-2858270,2858607-2858742,
2860778-2860890
Length = 515
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 363 VVVEGKHEEKQDE--HGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTV 506
+++E ++K+D+ GF+ R R L G +V+ LV + DG+ V
Sbjct: 50 LLLENSSKQKRDQGIKGFLYRSLEERSFLSAGIQVDGLVLGMFMDGIAGV 99
>06_03_0615 - 22761375-22761760,22762218-22765026
Length = 1064
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1
Query: 165 PSSDPCRSAGPVVWRGARCAPSHPTSRETSLVLSTSFL 52
PS DP +A P W+G C+P SR SL L +FL
Sbjct: 49 PSWDPT-AATPCSWQGVTCSPQ---SRVVSLSLPNTFL 82
>05_03_0323 - 12424243-12424776
Length = 177
Score = 29.1 bits (62), Expect = 2.2
Identities = 25/74 (33%), Positives = 31/74 (41%)
Frame = +2
Query: 281 DEREI*GYFRRSAIHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADRIRG 460
++RE +A H+ R HG+G G R RG GR H H AD +
Sbjct: 109 EQREAQQRHNIAAAHAMRPHGRGRGNGGNGR--GRGSAGRG--HAIGAHEDDVDADFVLD 164
Query: 461 QRPGQHVVFRRRAH 502
Q G RRRAH
Sbjct: 165 QDDGHQ---RRRAH 175
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 281 DEREI*GYFRRSAIHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADRIRG 460
D+R++ +R+ RRD + + R ++ GE+GR+ SV P H R RG
Sbjct: 435 DDRKVNSREQRADHDDRRDSAR---ERRADRDESNGESGRSSRRGRSVSPEEH---RHRG 488
Query: 461 QRPGQHVVFRRRAHRHG 511
+R + R+ HG
Sbjct: 489 RRESRQSPRSSRSAAHG 505
>03_06_0568 -
34778408-34778710,34779340-34779411,34779549-34779635,
34779722-34779880,34780641-34780739,34780823-34780903,
34781007-34781461,34781550-34781679,34781952-34782743
Length = 725
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 266 FDDQLDEREI*GYFRRSAIHSRRDHGQGVEQHG 364
+DD+L E+ YFRR S++ G G+ + G
Sbjct: 497 YDDELRREELLNYFRRFQSASQKKGGSGIFRQG 529
>03_04_0090 +
17228253-17228403,17229062-17229129,17229238-17230902,
17231002-17231143,17231648-17232399
Length = 925
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 304 ITSNFSFVKLIVEEDSCLAKLALQGLKYEFLKSEVEGNELMEDNRSSFFRPM 149
I S S ++ EEDS LA+ A+QG+K E+ S+ E ++ S F+ +
Sbjct: 846 IQSRSSMIRCSEEEDSRLAEDAMQGMK-EWKSSDSERQGIVLAIEKSIFKDL 896
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 77 DVSRLV---G*LGAHRAPLQTTGPALRHGSEEGRPVILHQFIPLDLALQKFILQTLEGEL 247
D+ RLV G +G +A L P +R + GRP+ QFI + + + ++ T+ L
Sbjct: 268 DLERLVLAAGPIGLMQACLDVAVPYVRQREQFGRPIGEFQFIQVQHFVNRRLVPTITSYL 327
Query: 248 SQTGIFFD 271
G D
Sbjct: 328 LMQGKLAD 335
>01_01_0228 + 1940149-1940649
Length = 166
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Frame = +3
Query: 330 DEITVKASN-NTVVVEGKHEEKQDEHGFISRQFTR-------RYILPTGYEVNDLVSTLS 485
+E+ V+ N +V+ G+ +++E G S R R+ LP V DLV
Sbjct: 65 EEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVV-DLVRASM 123
Query: 486 SDGVLTVTAP 515
G+LTVT P
Sbjct: 124 DGGMLTVTVP 133
>09_03_0205 - 13483981-13484291,13484402-13484531,13484742-13484939
Length = 212
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +2
Query: 308 RRSAIHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADR 451
RR A+ S DH + GCRR + G R H P HP DR
Sbjct: 40 RRVALLSSVDHPAPTQLRGCRR--SNQHQGVLRQHDPGA--TAHPLDR 83
>07_03_0316 +
16684100-16684339,16684425-16685132,16685241-16685939,
16685992-16686053,16686096-16686368,16686622-16686873,
16686954-16687064,16687152-16687212,16687312-16687404,
16687482-16687667
Length = 894
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 149 HGSEEGRPVILHQFIPLDLALQKFILQTLEGELSQTGIFFDDQLDEREI*G--YFRRSAI 322
HGSE R + H D +KF++ +G+ + + DD E+ G YF
Sbjct: 577 HGSEVPRVLRSHDSKSKDENKEKFMVTVFKGDKERAKLRDDDPQKAAELAGPTYFTTHDC 636
Query: 323 HSRRDHGQGV 352
+ +HG+ +
Sbjct: 637 PEKYEHGKAL 646
>12_02_0398 -
18586985-18587480,18587669-18587687,18588317-18588544,
18589699-18589966
Length = 336
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +2
Query: 302 YFRRSAIHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADRIRG 460
++RR +H R G+G G RRR TGR R P ADR RG
Sbjct: 27 WWRRRPVH--RGRGRG----GRRRRSGGDATGRRRGRVSGDFPAKRRADRGRG 73
>08_02_0679 + 20006105-20006488,20006615-20006848,20007929-20008138
Length = 275
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 95 G*LGAHRAPLQTTGPALRHGSEEGRPV-ILHQFIPLDLALQKFILQTLEGE 244
G A R +TGPA R GRPV +L F +A +LQ L E
Sbjct: 133 GRAAAQRGRRGSTGPASRRQEGGGRPVALLFMFFSWWVAFAGILLQELAPE 183
>03_01_0038 -
340564-341108,341214-341463,341546-341649,341728-343255,
343995-344056,344578-344728
Length = 879
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 258 ESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVV 368
E + +NL E E+I+D +F DE+ + +N+ ++
Sbjct: 843 EDGTWMNLQLESEEIIVDTWEFILDELLEEVANDLLI 879
>02_04_0550 -
23795957-23796154,23796596-23796650,23797324-23797376,
23797453-23797529,23797613-23797736,23797848-23797964,
23798439-23798547,23798724-23798829,23799043-23799106,
23799214-23799333
Length = 340
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 425 HPPVHPADRIRGQRPGQHVVFRR 493
H P H A+R R QR G HV +R
Sbjct: 180 HKPHHEAERERIQRAGGHVFLQR 202
>02_04_0538 +
23739830-23740126,23740205-23740261,23740344-23740441,
23740565-23740640,23741316-23741345,23741833-23741961,
23742077-23742123,23742477-23742531,23742939-23743038,
23743568-23743674,23743760-23743906,23744232-23744378,
23744473-23744526,23744873-23744914
Length = 461
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 314 SAIHSRRDHGQGVEQHGCRRRQARGETGRARL 409
+A RRD G G GCRRR+A+G+ A L
Sbjct: 65 AAASCRRDGGCG--GCGCRRRRAKGKPAAAEL 94
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,213,549
Number of Sequences: 37544
Number of extensions: 258647
Number of successful extensions: 1039
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -