Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30397
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 60 8e-10
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 59 2e-09
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 54 9e-08
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 53 2e-07
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 53 2e-07
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 52 3e-07
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 52 3e-07
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 49 3e-06
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 32 0.24
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 28 5.3
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 27 9.2
SB_44778| Best HMM Match : TPR_2 (HMM E-Value=0.00023) 27 9.2
SB_839| Best HMM Match : Spond_N (HMM E-Value=2.5) 27 9.2
SB_49842| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_1834| Best HMM Match : efhand (HMM E-Value=1e-06) 27 9.2
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 60.5 bits (140), Expect = 8e-10
Identities = 27/76 (35%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +3
Query: 288 EKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 464
+K E+ LDV+ + P+EI++K + + ++GKH+ + EHG+ + +F R Y LP G +V+
Sbjct: 38 DKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKS-EGEHGYETSEFHRSYNLPDGVDVS 96
Query: 465 DLVSTLSSDGVLTVTA 512
+ S ++ DG+L + A
Sbjct: 97 TVSSRITGDGLLHIEA 112
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 429 RRYILPTGYEVNDLVSTLSSDGVLTVTA 512
R ++LP +++ LVS L DG L + A
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEA 188
Score = 22.2 bits (45), Expect(2) = 1.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 288 EKFEVILDVQQFTPD 332
++F V LDV F+PD
Sbjct: 141 KRFTVTLDVSSFSPD 155
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +3
Query: 249 ARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFIS-RQF 425
A E+ + KF + LDV F P+E+ VK + + V + E +EHGF + RQF
Sbjct: 85 ATTENKAPATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQF 142
Query: 426 TRRYILPTGYEVNDLVSTLSSDGVLTVTA 512
R ++LP +++ LV L DGVL + A
Sbjct: 143 NRHFVLPREVDMDTLVPRLGKDGVLYIEA 171
Score = 58.4 bits (135), Expect = 3e-09
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +3
Query: 288 EKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 464
+KF++ LDV++F P+EIT K N + V G + +E GF S++F R Y LP G + +
Sbjct: 4 DKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVDES 62
Query: 465 DLVSTLSSDGVLTVTA 512
+ + ++ DG+L V A
Sbjct: 63 SISTRIAEDGMLHVEA 78
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 53.6 bits (123), Expect = 9e-08
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +3
Query: 306 LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLS 485
LDV+++ P+EI+ K N V V+G+H + E GF ++F R + LP G + ++ S +S
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGIDPENVTSRIS 70
Query: 486 SDGVLTVTA 512
+ G L + A
Sbjct: 71 NHGHLHIEA 79
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/72 (29%), Positives = 41/72 (56%)
Frame = +3
Query: 285 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 464
++KF + +DV F P+ I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 95 EDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREVDMD 153
Query: 465 DLVSTLSSDGVL 500
L + L +G L
Sbjct: 154 SLTTRLDKEGKL 165
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 285 KEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 461
+ K E+ LDV+++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 5 ENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 63
Query: 462 NDLVSTLSSDGVLTVTA 512
+++ + +S+ G L + A
Sbjct: 64 SNVKTRISNHGQLHIEA 80
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = +3
Query: 288 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 467
+KF + +DV+ F P+ I V+ N ++V HE + + H + + F R++ILP +++
Sbjct: 97 DKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFILPREVDMDS 155
Query: 468 LVSTLSSDGVL 500
L + L +G L
Sbjct: 156 LTTRLDKEGKL 166
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 LARQESSSTINLTKEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQ 422
L + S + L ++ E+ LDV+++ P+EI+ K N V V+G+H + GF ++
Sbjct: 225 LDEEVSCRLVYLQLDELEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKE 283
Query: 423 FTRRYILPTGYEVNDLVSTLSSDGVLTVTA 512
F R + LP G E +++ + +S+ G L + A
Sbjct: 284 FRRTFTLPEGVEASNVKTRISNHGQLHIEA 313
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 285 KEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 461
+ K E+ LDV+++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62
Query: 462 NDLVSTLSSDGVLTVTA 512
+++ + +S+ G L + A
Sbjct: 63 SNVKTRISNHGQLHIEA 79
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +3
Query: 288 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 467
+KF + +DV F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 468 LVSTLSSDGVL 500
L + L +G L
Sbjct: 156 LTTRLDKEGKL 166
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +3
Query: 288 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 467
+KF + +DV F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 389
Query: 468 LVSTLSSDGVL 500
L + L +G L
Sbjct: 390 LTTRLDKEGKL 400
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 285 KEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 461
+ K E+ LDV+++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62
Query: 462 NDLVSTLSSDGVLTVTA 512
+++ + +S+ G L + A
Sbjct: 63 SNVKTRISNHGQLHIEA 79
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +3
Query: 288 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 467
+KF + +DV F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 468 LVSTLSSDGVL 500
L + L +G L
Sbjct: 156 LTTRLDKEGKL 166
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 285 KEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 461
+ K E+ LDV+++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62
Query: 462 NDLVSTLSSDGVLTVTA 512
+++ + +S+ G L + A
Sbjct: 63 SNVKTRISNHGQLHIEA 79
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +3
Query: 288 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 467
+KF + +DV F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 468 LVSTLSSDGVL 500
L + L +G L
Sbjct: 156 LTTRLDKEGKL 166
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 285 KEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 461
+ K E+ LDV+++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62
Query: 462 NDLVSTLSSDGVLTVTA 512
+++ + +S+ G L + A
Sbjct: 63 SNVKTRISNHGQLHIEA 79
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +3
Query: 288 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 467
+KF + +DV F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 468 LVSTLSSDGVL 500
L + L +G L
Sbjct: 156 LTTRLDKEGKL 166
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 237 RASLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFI- 413
+A A +E+ S KF + LDV F P+E+ VK + + V + E +EHGF
Sbjct: 9 KAPPATKENQSAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFT 66
Query: 414 SRQFTRRYILP 446
+RQF R ++LP
Sbjct: 67 ARQFNRHFVLP 77
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 32.3 bits (70), Expect = 0.24
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +3
Query: 306 LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLS 485
L Q TP + + E K+EE DEHG I R+ T+ E + T++
Sbjct: 1165 LSTFQITPISQIPSSLTEKLQPETKYEEYVDEHGQIIRRTTKVKHTAVKQERTTVTKTVT 1224
Query: 486 SDGVLT 503
DGV T
Sbjct: 1225 RDGVTT 1230
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +2
Query: 314 SAIHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADRIRGQRP-GQHVVFR 490
S H RR + + RRR++R R R PS H H R R + P +H R
Sbjct: 215 SPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSH-RSRSRSRSPRRRHSRSR 273
Query: 491 RRAHR 505
HR
Sbjct: 274 SPTHR 278
>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +3
Query: 243 SLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTV 365
S A+Q +S +LT K EV + V Q TP E K SNN +
Sbjct: 396 SNAQQATSKEQHLTS-KGEVQVPVGQITPSEQASKTSNNAL 435
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 27.9 bits (59), Expect = 5.3
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 378 KHEEKQDEHGFISRQFTRRYIL 443
KHEE++D HG++ + T ++ L
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 320 IHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADRI--RGQRPGQH 478
+ RR+H GV CR RQ R R H P V + ++ RG+R +H
Sbjct: 504 VRERRNH-PGVAIRRCRTRQVSQRGERERRHHPGVAICRYRTRQVSQRGERERRH 557
>SB_44778| Best HMM Match : TPR_2 (HMM E-Value=0.00023)
Length = 1016
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 261 SSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEH 404
+S +NLT + + D T D++ + + N + +G H D H
Sbjct: 360 TSDDVNLTSDDVHLTSDGVHLTSDDVHLTSDNVHLTSDGVHLTSDDVH 407
>SB_839| Best HMM Match : Spond_N (HMM E-Value=2.5)
Length = 873
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 344 QGVEQHGCRRRQARGETGRARLH 412
+G+ GCRRRQ +G+ + LH
Sbjct: 313 EGLYSGGCRRRQGKGQRYDSHLH 335
>SB_49842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 250 AKLALQGLKYEFLKSEVEGNELMEDNRSSF 161
AK +L + YE+ S E E + +NR +F
Sbjct: 26 AKDSLSKIAYEYFSSGAENEETLRENREAF 55
>SB_1834| Best HMM Match : efhand (HMM E-Value=1e-06)
Length = 659
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 228 RPWRASLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEH 404
R RA+ R ++LTK + E+I+D +F I + N + K E D+H
Sbjct: 468 RMLRANFIRAMDMCCLDLTKREIEIIMDRMKFIMMMIVMYDGEND--EDDKDEGDDDDH 524
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,465,596
Number of Sequences: 59808
Number of extensions: 273290
Number of successful extensions: 860
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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