Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30396
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 200 6e-52
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 200 6e-52
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 199 8e-52
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 199 8e-52
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 199 8e-52
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 199 8e-52
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 199 8e-52
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 199 8e-52
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 199 8e-52
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 199 8e-52
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 194 2e-50
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 148 3e-36
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 148 3e-36
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 147 5e-36
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 146 8e-36
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 146 8e-36
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 121 3e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 109 2e-24
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 93 1e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.003
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.003
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 36 0.013
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.37
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.1
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 1.5
AF043699-3|AAB97566.1| 1220|Caenorhabditis elegans Temporarily a... 28 4.6
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.6
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 4.6
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 6.0
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 6.0
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 6.0
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 6.0
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 6.0
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 200 bits (487), Expect = 6e-52
Identities = 90/93 (96%), Positives = 93/93 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
Score = 148 bits (358), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 200 bits (487), Expect = 6e-52
Identities = 90/93 (96%), Positives = 93/93 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
Score = 146 bits (354), Expect = 8e-36
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 199 bits (486), Expect = 8e-52
Identities = 89/93 (95%), Positives = 93/93 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Score = 146 bits (354), Expect = 8e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 199 bits (486), Expect = 8e-52
Identities = 89/93 (95%), Positives = 93/93 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Score = 146 bits (354), Expect = 8e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (486), Expect = 8e-52
Identities = 89/93 (95%), Positives = 93/93 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Score = 146 bits (354), Expect = 8e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 199 bits (486), Expect = 8e-52
Identities = 89/93 (95%), Positives = 93/93 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Score = 146 bits (354), Expect = 8e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (486), Expect = 8e-52
Identities = 89/93 (95%), Positives = 93/93 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Score = 146 bits (354), Expect = 8e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 199 bits (486), Expect = 8e-52
Identities = 89/93 (95%), Positives = 93/93 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 25 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 84
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 85 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 117
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3
Query: 165 MVGMGQKDSYVGDEAQSKRGILTXEVP 245
MVGMGQKDSYVGDEAQSKRGILT + P
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYP 27
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 199 bits (486), Expect = 8e-52
Identities = 89/93 (95%), Positives = 93/93 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 55 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 114
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 115 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 147
Score = 107 bits (257), Expect = 5e-24
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +3
Query: 87 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTXEVP 245
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT + P
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 57
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 199 bits (486), Expect = 8e-52
Identities = 89/93 (95%), Positives = 93/93 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Score = 146 bits (354), Expect = 8e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 194 bits (474), Expect = 2e-50
Identities = 86/93 (92%), Positives = 92/93 (98%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETF
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETF 127
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
N+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+
Sbjct: 128 NTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVT 160
Score = 137 bits (331), Expect = 5e-33
Identities = 62/69 (89%), Positives = 67/69 (97%)
Frame = +3
Query: 39 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 218
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 219 RGILTXEVP 245
RGILT + P
Sbjct: 62 RGILTLKYP 70
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 148 bits (358), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKI 291
KYPIEHGI+TNWDDMEKI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 148 bits (358), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDM 282
KYPIEHGI+TNWDDM
Sbjct: 69 KYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 147 bits (356), Expect = 5e-36
Identities = 63/94 (67%), Positives = 80/94 (85%), Gaps = 1/94 (1%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 414
+YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 415 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVT 164
Score = 68.9 bits (161), Expect = 2e-12
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Frame = +3
Query: 39 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 209
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 210 QSKRGILTXEVP 245
+S RG+ + E P
Sbjct: 62 ESNRGLFSIEYP 73
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 146 bits (354), Expect = 8e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKI 291
KYPIEHGI+TNWDDMEKI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 146 bits (354), Expect = 8e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 212
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 213 SKRGILTXEVP 245
SKRGILT + P
Sbjct: 61 SKRGILTLKYP 71
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKI 291
KYPIEHGI+TNWDDMEKI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 121 bits (292), Expect = 3e-28
Identities = 54/93 (58%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
Frame = +1
Query: 241 YPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE +
Sbjct: 72 YPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQY 131
Query: 418 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 516
++YVA+QAVL+LYA G TG+V+DSGDGV+
Sbjct: 132 GFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVT 164
Score = 51.2 bits (117), Expect = 4e-07
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 57 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 230
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 231 TXEVP 245
P
Sbjct: 69 DINYP 73
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 109 bits (261), Expect = 2e-24
Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 8/101 (7%)
Frame = +1
Query: 238 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 417
KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+F
Sbjct: 82 KYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESF 141
Query: 418 NSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVS 516
N P +Y+A+QAVL+L AS + TG+V+DSGDGV+
Sbjct: 142 NVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVT 182
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 33 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 140
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 92.7 bits (220), Expect = 1e-19
Identities = 46/104 (44%), Positives = 69/104 (66%)
Frame = +1
Query: 193 TWVTRPRAREVSSLXKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 372
T + PRAR +++ + ++ G+I +W+ EKI H++ N L P EHPVL +E+ N
Sbjct: 79 TKIIVPRAR--TNMESF-MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWND 135
Query: 373 KANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 504
+A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG
Sbjct: 136 RARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
Score = 33.9 bits (74), Expect = 0.069
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 42 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 140
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +1
Query: 244 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 423
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 424 PAMYVAIQAVLSLYASGRTT----GIVLDSG 504
++ + L S + +V+DSG
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +1
Query: 244 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 423
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 424 PAMYVAIQAVLSLYASGRTT----GIVLDSG 504
++ + L S + +V+DSG
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 36.3 bits (80), Expect = 0.013
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +1
Query: 313 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 492
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 493 LDSGDGVS 516
+D G+ V+
Sbjct: 326 VDIGERVN 333
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 512 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 417
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 64 STMAPACARPVSPATTRPAPSSRP 135
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 55 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 162
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 178 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 68
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF043699-3|AAB97566.1| 1220|Caenorhabditis elegans Temporarily
assigned gene nameprotein 203 protein.
Length = 1220
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +3
Query: 102 GDDAPRAVFPS--IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTXEVPHRARYHHQL 272
G R + P +VG PR + +M+G ++ V + LT P A HH L
Sbjct: 109 GKTGCRRIVPGHFLVGDPRGRALMIGAVERQKLVYIMNRDSEAHLTISSPLEAHKHHTL 167
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 87 KAGFAGDDAPRAVFPSIVGRPRHQG 161
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 64 STMAPACARPVSPATTRPAPSSRPSWVALATRA 162
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 228 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 145
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 228 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 145
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 228 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 145
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 228 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 145
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 228 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 145
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -1
Query: 273 PVGDDTVLDGVLXE*GYLSCSGPRHPRRSLSGPYRPSRPGGEGD 142
P G V E G GP+ P + P R +PG GD
Sbjct: 193 PQGGSNVAPSPAGEPGAPGAQGPKGPPGAAGRPGRDGQPGAPGD 236
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -1
Query: 273 PVGDDTVLDGVLXE*GYLSCSGPRHPRRSLSGPYRPSRPGGEGD 142
P G V E G GP+ P + P R +PG GD
Sbjct: 246 PQGGSNVAPSPAGEPGAPGAQGPKGPPGAAGRPGRDGQPGAPGD 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,780,893
Number of Sequences: 27780
Number of extensions: 230805
Number of successful extensions: 1087
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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