Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30394
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 188 7e-47
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 187 2e-46
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 186 3e-46
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 185 6e-46
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 184 1e-45
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 183 2e-45
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 182 4e-45
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 180 2e-44
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 177 2e-43
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 175 7e-43
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 168 7e-41
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 166 2e-40
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 159 3e-38
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 159 3e-38
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 155 4e-37
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 150 2e-35
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 149 5e-35
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 147 1e-34
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 144 1e-33
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 144 1e-33
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 140 1e-32
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 139 4e-32
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 136 3e-31
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 134 1e-30
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 128 6e-29
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 127 1e-28
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 126 2e-28
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 123 3e-27
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 120 2e-26
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 120 3e-26
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 115 6e-25
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 114 1e-24
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 114 1e-24
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 113 2e-24
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 111 9e-24
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 108 8e-23
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 104 1e-21
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 101 7e-21
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 96 4e-19
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 96 5e-19
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 93 3e-18
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 92 6e-18
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 91 1e-17
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 91 1e-17
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 91 1e-17
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 90 3e-17
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 86 4e-16
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 85 7e-16
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 85 9e-16
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 85 1e-15
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 84 2e-15
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 82 6e-15
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 82 6e-15
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 81 1e-14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 80 3e-14
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 80 3e-14
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 79 6e-14
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 79 8e-14
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 77 2e-13
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 77 2e-13
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 76 4e-13
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 76 4e-13
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 76 6e-13
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 75 7e-13
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 75 7e-13
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 75 1e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 75 1e-12
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 74 2e-12
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 74 2e-12
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 73 3e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 73 4e-12
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 71 1e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 2e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 71 2e-11
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 71 2e-11
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 71 2e-11
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 69 5e-11
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 66 4e-10
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 66 4e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 65 1e-09
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 63 3e-09
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 63 4e-09
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 61 1e-08
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 61 2e-08
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 60 3e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 4e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 58 9e-08
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 57 2e-07
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 57 3e-07
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 56 6e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 52 1e-05
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 51 2e-05
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 49 6e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 1e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 7e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 38 0.14
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.24
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 0.72
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.3
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 1.3
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 2.2
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 3.9
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 3.9
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 5.1
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 5.1
UniRef50_Q60AP6 Cluster: Putative membrane protein; n=1; Methylo... 32 8.9
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 188 bits (458), Expect = 7e-47
Identities = 97/142 (68%), Positives = 100/142 (70%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 79 PPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFI 138
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGG
Sbjct: 139 TTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGG 198
Query: 394 GDPILYQHLF*FFGHPEVYILI 459
GDPILYQHLF FFGHPEVYILI
Sbjct: 199 GDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 187 bits (455), Expect = 2e-46
Identities = 97/161 (60%), Positives = 106/161 (65%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 107 PPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFI 166
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
S Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGG
Sbjct: 167 TTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGG 226
Query: 394 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKE 516
GDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE
Sbjct: 227 GDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKE 267
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 186 bits (452), Expect = 3e-46
Identities = 94/149 (63%), Positives = 103/149 (69%)
Frame = +1
Query: 70 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 429
Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 178 QYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 430 FGHPEVYILILPGFGIISHIISQERGKKE 516
FGHPEVYILILPGFGIISH+++ GKKE
Sbjct: 238 FGHPEVYILILPGFGIISHVVAYYAGKKE 266
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 185 bits (450), Expect = 6e-46
Identities = 94/159 (59%), Positives = 107/159 (67%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 109 PPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFI 168
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
+ +LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGG
Sbjct: 169 TTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGG 228
Query: 394 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 510
GDPILYQHLF FFGHPEVYILILPGFGIISHI+S GK
Sbjct: 229 GDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSGK 267
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 184 bits (447), Expect = 1e-45
Identities = 95/161 (59%), Positives = 106/161 (65%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 106 PPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFI 165
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
+ Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGG
Sbjct: 166 TTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGG 225
Query: 394 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKE 516
GDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE
Sbjct: 226 GDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKE 266
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 183 bits (446), Expect = 2e-45
Identities = 93/159 (58%), Positives = 105/159 (66%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 106 PPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFI 165
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
+ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGG
Sbjct: 166 TTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGG 225
Query: 394 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 510
GDPILYQHLF FFGHPEVYILI+PGFG++SHI+S GK
Sbjct: 226 GDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSGK 264
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 182 bits (443), Expect = 4e-45
Identities = 91/149 (61%), Positives = 103/149 (69%)
Frame = +1
Query: 70 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 429
Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 178 QYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 430 FGHPEVYILILPGFGIISHIISQERGKKE 516
FGHPEVYILILPGFG+ISH+++ GKKE
Sbjct: 238 FGHPEVYILILPGFGMISHVVTYYAGKKE 266
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 180 bits (438), Expect = 2e-44
Identities = 93/138 (67%), Positives = 97/138 (70%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 103 PPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFI 162
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
SFDQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGG
Sbjct: 163 TTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGG 222
Query: 394 GDPILYQHLF*FFGHPEV 447
GDPILYQHLF FFGHP++
Sbjct: 223 GDPILYQHLFWFFGHPKL 240
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 177 bits (430), Expect = 2e-43
Identities = 90/146 (61%), Positives = 99/146 (67%)
Frame = +1
Query: 79 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 258
G GTG TVYPPLS + H G SVDL IFSLHLAG SS + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 259 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 438
+ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGH
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGH 224
Query: 439 PEVYILILPGFGIISHIISQERGKKE 516
PEVYILILPGFGIISH+I E GKKE
Sbjct: 225 PEVYILILPGFGIISHMIFNESGKKE 250
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 175 bits (425), Expect = 7e-43
Identities = 89/154 (57%), Positives = 103/154 (66%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 114 PPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFI 173
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
S ++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GG
Sbjct: 174 STILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGG 233
Query: 394 GDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 495
GDPILYQHLF FFGHPEVYILILPGFG+ISHI+S
Sbjct: 234 GDPILYQHLFWFFGHPEVYILILPGFGMISHIVS 267
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 168 bits (408), Expect = 7e-41
Identities = 85/143 (59%), Positives = 96/143 (67%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
S ++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F
Sbjct: 178 SMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFW 237
Query: 427 FFGHPEVYILILPGFGIISHIIS 495
FFGHPEVYILI+PGFGI+SHI+S
Sbjct: 238 FFGHPEVYILIIPGFGIVSHIVS 260
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 166 bits (404), Expect = 2e-40
Identities = 83/143 (58%), Positives = 98/143 (68%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
+ +LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFW 237
Query: 427 FFGHPEVYILILPGFGIISHIIS 495
FFGHPEVYILI+PGFGIISH++S
Sbjct: 238 FFGHPEVYILIIPGFGIISHVVS 260
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 159 bits (387), Expect = 3e-38
Identities = 84/147 (57%), Positives = 93/147 (63%)
Frame = +1
Query: 70 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIR 178
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 429
+L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF F
Sbjct: 179 LHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWF 238
Query: 430 FGHPEVYILILPGFGIISHIISQERGK 510
FGHPEVYILI+PGFGIIS IS K
Sbjct: 239 FGHPEVYILIIPGFGIISTTISANSNK 265
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 159 bits (386), Expect = 3e-38
Identities = 80/141 (56%), Positives = 90/141 (63%)
Frame = +1
Query: 73 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 252
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFN 182
Query: 253 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 432
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FF
Sbjct: 183 KDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFF 242
Query: 433 GHPEVYILILPGFGIISHIIS 495
GHPEVYILILPGFG++SHII+
Sbjct: 243 GHPEVYILILPGFGLVSHIIA 263
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 155 bits (377), Expect = 4e-37
Identities = 84/158 (53%), Positives = 95/158 (60%)
Frame = +1
Query: 37 PPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXX 216
P L+ I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 134 PSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIA 193
Query: 217 XXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 396
+L LF AV ITA A AIT+LLTDRNLNTSF++ AGGG
Sbjct: 194 TLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGG 253
Query: 397 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 510
D ILYQHLF FFGHPEVYILI+PGFGIIS +IS K
Sbjct: 254 DAILYQHLFWFFGHPEVYILIIPGFGIISTVISANSNK 291
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 150 bits (363), Expect = 2e-35
Identities = 70/143 (48%), Positives = 94/143 (65%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGM 282
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
+ ++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F
Sbjct: 283 TLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFW 342
Query: 427 FFGHPEVYILILPGFGIISHIIS 495
FFGHPEVYI+ILP FG+ISHI++
Sbjct: 343 FFGHPEVYIVILPAFGVISHIVA 365
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 149 bits (360), Expect = 5e-35
Identities = 77/140 (55%), Positives = 92/140 (65%)
Frame = +1
Query: 76 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 255
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 256 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 435
++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFG
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFG 282
Query: 436 HPEVYILILPGFGIISHIIS 495
HPEVYI+ILPGFGIIS I+S
Sbjct: 283 HPEVYIMILPGFGIISQIVS 302
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 147 bits (356), Expect = 1e-34
Identities = 77/135 (57%), Positives = 86/135 (63%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L + VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 25 PPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFI 84
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
+ ++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGG
Sbjct: 85 STVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGG 144
Query: 394 GDPILYQHLF*FFGH 438
GDPILYQHLF F GH
Sbjct: 145 GDPILYQHLFWFXGH 159
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 144 bits (349), Expect = 1e-33
Identities = 68/142 (47%), Positives = 93/142 (65%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 427 FFGHPEVYILILPGFGIISHII 492
FFGHPEVYILI+P FG++S I+
Sbjct: 255 FFGHPEVYILIVPVFGVVSQIV 276
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 144 bits (349), Expect = 1e-33
Identities = 68/142 (47%), Positives = 93/142 (65%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 427 FFGHPEVYILILPGFGIISHII 492
FFGHPEVYILI+P FG++S I+
Sbjct: 255 FFGHPEVYILIVPVFGVVSQIV 276
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 140 bits (340), Expect = 1e-32
Identities = 74/134 (55%), Positives = 85/134 (63%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L+ +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 107 PPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFI 166
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
+ ++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGG
Sbjct: 167 TTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGG 226
Query: 394 GDPILYQHLF*FFG 435
GDPILYQHLF FFG
Sbjct: 227 GDPILYQHLFWFFG 240
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 139 bits (336), Expect = 4e-32
Identities = 74/130 (56%), Positives = 80/130 (61%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 89 PPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFI 148
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
+ + LFV +V ITA AGAIT+LLTDRN NTSFFDPAGG
Sbjct: 149 TTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGG 208
Query: 394 GDPILYQHLF 423
GDPILYQHLF
Sbjct: 209 GDPILYQHLF 218
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 136 bits (329), Expect = 3e-31
Identities = 72/130 (55%), Positives = 80/130 (61%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 106 PPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFI 165
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
+ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGG
Sbjct: 166 TTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGG 225
Query: 394 GDPILYQHLF 423
GDPILYQHLF
Sbjct: 226 GDPILYQHLF 235
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 134 bits (323), Expect = 1e-30
Identities = 79/163 (48%), Positives = 92/163 (56%), Gaps = 4/163 (2%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXX 201
PP L I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 135 PPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGS 194
Query: 202 XXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 381
+L LF A + IT++LTDRN NTSFF+
Sbjct: 195 INFITTVANMRTPGIKLHKLALFGWATWSSRSRYFL-------GITMVLTDRNFNTSFFE 247
Query: 382 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 510
AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 248 VAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 128 bits (310), Expect = 6e-29
Identities = 68/132 (51%), Positives = 82/132 (62%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
+ +LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFW 237
Query: 427 FFGHPEVYILIL 462
FFG I++L
Sbjct: 238 FFGQTVATIIML 249
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 127 bits (307), Expect = 1e-28
Identities = 66/145 (45%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
Frame = +1
Query: 79 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 258
G G G T+YPPLS++ G +DLA+FSLH+AG+SS F
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMS 182
Query: 259 L-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 435
L P+ + + T+ A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFG
Sbjct: 183 LNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFG 242
Query: 436 HPEVYILILPGFGIISHIISQERGK 510
HPEVYILILP FG+ISHI+ + K
Sbjct: 243 HPEVYILILPAFGVISHILCRSSAK 267
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 126 bits (305), Expect = 2e-28
Identities = 69/119 (57%), Positives = 78/119 (65%)
Frame = -2
Query: 422 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 243
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 242 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTI 66
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTI 118
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 123 bits (296), Expect = 3e-27
Identities = 64/123 (52%), Positives = 77/123 (62%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGM 177
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
+ +LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF
Sbjct: 178 TMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFW 237
Query: 427 FFG 435
FFG
Sbjct: 238 FFG 240
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 120 bits (289), Expect = 2e-26
Identities = 62/142 (43%), Positives = 79/142 (55%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFF 179
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
SF LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F
Sbjct: 180 SFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFW 239
Query: 427 FFGHPEVYILILPGFGIISHII 492
FFGHPEVYI++LP FG+IS I+
Sbjct: 240 FFGHPEVYIILLPVFGLISTIV 261
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 120 bits (288), Expect = 3e-26
Identities = 67/137 (48%), Positives = 79/137 (57%)
Frame = +1
Query: 79 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 258
G G G T+YPPLS G VD +FSLHLAG+SS S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS--- 272
Query: 259 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 438
+ V A T+ A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGH
Sbjct: 273 --IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGH 330
Query: 439 PEVYILILPGFGIISHI 489
PEVY+LILPGFGI+SHI
Sbjct: 331 PEVYVLILPGFGIVSHI 347
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 115 bits (277), Expect = 6e-25
Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 427 FFGH--PEVYILIL 462
FFG P + I+I+
Sbjct: 255 FFGQIWPIIIIIII 268
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 114 bits (275), Expect = 1e-24
Identities = 63/142 (44%), Positives = 79/142 (55%)
Frame = +1
Query: 37 PPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXX 216
P L +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 113 PSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFIT 172
Query: 217 XXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 396
++ +PLF AV TA A +T+ + DRN NTSFF+ AGGG
Sbjct: 173 TFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGG 232
Query: 397 DPILYQHLF*FFGHPEVYILIL 462
D +LYQHLF ++ HPEV I+ L
Sbjct: 233 DAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 114 bits (274), Expect = 1e-24
Identities = 61/142 (42%), Positives = 82/142 (57%), Gaps = 1/142 (0%)
Frame = +1
Query: 73 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
E G GTG T+YPPLS+++ +VD+ IF L ++G++S +
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLT 183
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 429
L + ++ IT+ G + +LL+D + NT FFDP GDPILYQHLF F
Sbjct: 184 LGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWF 243
Query: 430 FGHPEVYILILPGFGIISHIIS 495
FGHPEVYILILP FG+ISH+IS
Sbjct: 244 FGHPEVYILILPAFGVISHVIS 265
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 113 bits (273), Expect = 2e-24
Identities = 60/146 (41%), Positives = 77/146 (52%)
Frame = +1
Query: 55 FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 234
+Q + G G+ T YPPLS S+D I LH GI S
Sbjct: 124 YQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMR 182
Query: 235 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 414
+ DQ+ +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQ
Sbjct: 183 STAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQ 242
Query: 415 HLF*FFGHPEVYILILPGFGIISHII 492
HLF FFGHPEVY++ILP FGIIS +
Sbjct: 243 HLFWFFGHPEVYVIILPVFGIISEAV 268
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 111 bits (267), Expect = 9e-24
Identities = 57/142 (40%), Positives = 82/142 (57%)
Frame = +1
Query: 70 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFV 183
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 429
D++ ++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF F
Sbjct: 184 IDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWF 243
Query: 430 FGHPEVYILILPGFGIISHIIS 495
FGHPEVYI+ILPGFGIIS ++S
Sbjct: 244 FGHPEVYIMILPGFGIISLLLS 265
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 108 bits (259), Expect = 8e-23
Identities = 59/137 (43%), Positives = 82/137 (59%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI-- 252
Query: 427 FFGHPEVYILILPGFGI 477
F+ +P V ILI GI
Sbjct: 253 FYKNP-VLILIWLTSGI 268
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 104 bits (250), Expect = 1e-21
Identities = 58/105 (55%), Positives = 63/105 (60%)
Frame = +1
Query: 70 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 384
Q PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 167 QYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 101 bits (243), Expect = 7e-21
Identities = 58/137 (42%), Positives = 76/137 (55%)
Frame = +1
Query: 82 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 261
A G T YPPLSS SV+ ++FSLHLAGI+S + L
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSL 165
Query: 262 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 441
LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGHP
Sbjct: 166 SLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHP 225
Query: 442 EVYILILPGFGIISHII 492
EVY++ILP FG+ S I
Sbjct: 226 EVYVVILPVFGLFSSSI 242
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 96.3 bits (229), Expect = 4e-19
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Frame = +1
Query: 82 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 261
AG G T Y PLS+N+ G L + ++ + G+SS ++ +L
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 262 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF* 426
PL + + +TA A +LL DR+ T FF GGGDPIL+QHLF
Sbjct: 215 PLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFW 274
Query: 427 FFGHPEVYILILPGFGIISHIIS 495
FGHPEVYI+ILP +GI+ ++S
Sbjct: 275 IFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 95.9 bits (228), Expect = 5e-19
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
Frame = +1
Query: 88 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 264
+G T+YPPLS+ A G ++DL++ +H+ GISS +F +
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194
Query: 265 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 444
++ ++ +T+ AIT LL DRN+N++ +D G DP+LYQHLF FFGHPE
Sbjct: 195 IYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPE 252
Query: 445 VYILILPGFGIISHIIS 495
VY++ILP FG+ S I++
Sbjct: 253 VYVIILPVFGLTSLILT 269
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 93.1 bits (221), Expect = 3e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 358 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKE 516
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKRE 243
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 92.3 bits (219), Expect = 6e-18
Identities = 52/130 (40%), Positives = 66/130 (50%)
Frame = +1
Query: 103 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 282
Y PLSS + VD I L + GI S S ++PLFV +
Sbjct: 148 YVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMM 207
Query: 283 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 462
+ A A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILIL
Sbjct: 208 LMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILIL 267
Query: 463 PGFGIISHII 492
PGFG+IS +I
Sbjct: 268 PGFGMISEVI 277
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 91.5 bits (217), Expect = 1e-17
Identities = 59/149 (39%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Frame = +1
Query: 82 AGTG*TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
A TG T+Y PLS N A+ G VDL + LHL+G+S+
Sbjct: 206 AQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNV 263
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
S+ L +F + + AI +LL DRN TSFF AG G IL+QHLF
Sbjct: 264 SWANLDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFW 321
Query: 427 FFGHPEVYILILPGFGIISHIISQERGKK 513
FFGHPEVYI++LP GIIS+I+ + G++
Sbjct: 322 FFGHPEVYIIVLPPMGIISYILPRFSGRR 350
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 91.5 bits (217), Expect = 1e-17
Identities = 54/134 (40%), Positives = 67/134 (50%)
Frame = +1
Query: 91 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 270
G T YPPLS G +L I SL L G SS +PLF
Sbjct: 138 GWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLF 195
Query: 271 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 450
A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VY
Sbjct: 196 CWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVY 255
Query: 451 ILILPGFGIISHII 492
I+ILP FG+IS +I
Sbjct: 256 IMILPFFGVISEVI 269
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 91.1 bits (216), Expect = 1e-17
Identities = 50/142 (35%), Positives = 72/142 (50%)
Frame = +1
Query: 70 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
V+ G G Y PLS G+ D+ + +S+ S
Sbjct: 134 VDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMS 193
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 429
D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF F
Sbjct: 194 LDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWF 253
Query: 430 FGHPEVYILILPGFGIISHIIS 495
FGHPEVYI+ LP G++S I++
Sbjct: 254 FGHPEVYIIFLPAVGMVSSIVA 275
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 89.8 bits (213), Expect = 3e-17
Identities = 52/144 (36%), Positives = 74/144 (51%)
Frame = +1
Query: 82 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 261
A T T+Y PLS ++ +VD+ + LHL G+S+ + L
Sbjct: 179 AQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDL 236
Query: 262 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 441
+F + + A+ +LL DRN T+FF AGG DPI +QHLF FFGHP
Sbjct: 237 DIFSWTMLTQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHP 295
Query: 442 EVYILILPGFGIISHIISQERGKK 513
EVY+L+LP GI+S I+ + G+K
Sbjct: 296 EVYVLVLPPMGIVSLILPKFSGRK 319
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 86.2 bits (204), Expect = 4e-16
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
++ G TG T Y P S AH +V +F + G SS
Sbjct: 146 MLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGI 202
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF 423
++ ++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF
Sbjct: 203 TWFKMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLF 261
Query: 424 *FFGHPEVYILILPGFGIISHIIS 495
F+ HP VYI++LP FG++S +++
Sbjct: 262 WFYSHPAVYIMVLPSFGVMSEVVA 285
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 85.4 bits (202), Expect = 7e-16
Identities = 50/147 (34%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Frame = +1
Query: 73 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 252
++G G T+YPPLS+ + VDL + + +AG SS
Sbjct: 126 QHGDSIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKM 183
Query: 253 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQH 417
+ LF +V + A +LL +R+L FF DPA GDP L+QH
Sbjct: 184 LDMSLFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQH 243
Query: 418 LF*FFGHPEVYILILPGFGIISHIISQ 498
+F FFGHPEVYIL+LP G++S +I +
Sbjct: 244 IFWFFGHPEVYILVLPAMGLVSEVIQR 270
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 85.0 bits (201), Expect = 9e-16
Identities = 48/132 (36%), Positives = 66/132 (50%)
Frame = +1
Query: 97 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 276
T YPP S N + L +F +HL G SS +F + LFV
Sbjct: 85 TGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVH 142
Query: 277 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 456
+ AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+
Sbjct: 143 TLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQ 202
Query: 457 ILPGFGIISHII 492
+LP FG S II
Sbjct: 203 VLPVFGFYSEII 214
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 84.6 bits (200), Expect = 1e-15
Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = +1
Query: 82 AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 255
A +G YPP+S + + H L I ++ L+GISS F
Sbjct: 146 ASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFF 205
Query: 256 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 435
++P+FV G +LL D + TSFF P GGGDP+L+QH F F+
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYS 265
Query: 436 HPEVYILILPGFGIISHI 489
HP VY+L+LP FGI S +
Sbjct: 266 HPAVYVLVLPVFGIFSEL 283
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 84.2 bits (199), Expect = 2e-15
Identities = 51/141 (36%), Positives = 65/141 (46%)
Frame = +1
Query: 70 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
V G Y PL+ VD I + L G++S +
Sbjct: 136 VGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMT 195
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 429
+++PLFV + AF A LL DR+ T FF P GGD +L+QHLF F
Sbjct: 196 LNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWF 255
Query: 430 FGHPEVYILILPGFGIISHII 492
FGHPEVYILILP GIIS ++
Sbjct: 256 FGHPEVYILILPTMGIISEVL 276
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 82.2 bits (194), Expect = 6e-15
Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Frame = +1
Query: 91 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 261
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 262 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 441
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 442 EVYILILPGFGIISHIISQERGKK 513
EVY+LI+P FG I+ I+ ++
Sbjct: 403 EVYVLIIPTFGFINMIVPHNNTRR 426
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 82.2 bits (194), Expect = 6e-15
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = +1
Query: 73 ENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
E+GA G T+Y PL++ I G +DLA ++ L +S
Sbjct: 127 ESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIG 186
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF* 426
+ ++P+F ++ T +LL DRNL T FF +PAGG +L+ HLF
Sbjct: 187 WFKMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFW 244
Query: 427 FFGHPEVYILILPGFGIISHIISQERGK 510
FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 245 FFGHPEVYILLFPALGAMADVISTFSGK 272
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 81.0 bits (191), Expect = 1e-14
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +3
Query: 357 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKK 512
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKK 58
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 80.2 bits (189), Expect = 3e-14
Identities = 41/134 (30%), Positives = 66/134 (49%)
Frame = +1
Query: 91 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 270
G T Y LS + +G +D + L ++G+ + ++ +LPLF
Sbjct: 136 GWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLF 193
Query: 271 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 450
+ + + +++ DR T+FF+P GG+ ++++HLF FGHPEVY
Sbjct: 194 TWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVY 253
Query: 451 ILILPGFGIISHII 492
ILILP FGI S +I
Sbjct: 254 ILILPAFGIFSEVI 267
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 79.8 bits (188), Expect = 3e-14
Identities = 48/137 (35%), Positives = 64/137 (46%)
Frame = +1
Query: 82 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 261
A G T+Y PLS I G D+ I + GI S + ++
Sbjct: 148 ADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRM 207
Query: 262 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 441
P+F + + + A +L DR L +DPA GG +L+QHLF FFGHP
Sbjct: 208 PIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHP 266
Query: 442 EVYILILPGFGIISHII 492
EVY+L LP FGI+S II
Sbjct: 267 EVYVLALPFFGIVSEII 283
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 79.0 bits (186), Expect = 6e-14
Identities = 46/129 (35%), Positives = 65/129 (50%)
Frame = +1
Query: 106 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 285
PP S I+ G + D+ IF L + GISS S Q+PL +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 286 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 465
++ A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIP 251
Query: 466 GFGIISHII 492
G++ ++
Sbjct: 252 AIGMMYEMV 260
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 78.6 bits (185), Expect = 8e-14
Identities = 44/142 (30%), Positives = 66/142 (46%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+V+ GA TG T Y P S+ + V L F L G SS
Sbjct: 139 MVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGM 195
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
+ +LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F
Sbjct: 196 GWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFW 255
Query: 427 FFGHPEVYILILPGFGIISHII 492
F+ HP VYI++LP +IS ++
Sbjct: 256 FYSHPAVYIMVLPAMAVISEVV 277
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 77.4 bits (182), Expect = 2e-13
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +1
Query: 70 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
V N A TG YPPL+ VD I++L ++GI +
Sbjct: 163 VGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMK 222
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 429
+P+F GA+ +L DR L+ FF GG+ ++Y +LF
Sbjct: 223 LMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWA 282
Query: 430 FGHPEVYILILPGFGIISHIISQERGKK 513
+GHPEVYIL+LP FGI S ++S GK+
Sbjct: 283 WGHPEVYILVLPAFGIFSEVVSTFAGKR 310
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 77.4 bits (182), Expect = 2e-13
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Frame = +1
Query: 76 NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
+GA G T YPPLS ++ G + L + + G+SS
Sbjct: 155 HGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGM 214
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGG 393
+ +LPL + A+ ITA A ++L DR + T FF P AGG
Sbjct: 215 TMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGG 274
Query: 394 GDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 495
G P+L+QHLF F+ HP VYI+ILP G++S I++
Sbjct: 275 GQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILA 308
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 76.2 bits (179), Expect = 4e-13
Identities = 56/166 (33%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Frame = +1
Query: 55 FQXRIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 222
F +E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 161 FASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITTV 220
Query: 223 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG 390
SF +LPL + A ITA A +L+ DR+L TSFF AG
Sbjct: 221 INLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAG 280
Query: 391 ------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 510
GG P+L+QHLF F GHPEVYI+++P GI S +I+ K
Sbjct: 281 EALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIATNARK 326
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 76.2 bits (179), Expect = 4e-13
Identities = 43/127 (33%), Positives = 60/127 (47%)
Frame = +1
Query: 103 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 282
Y PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 283 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 462
+ + A +L DRN T FFD A GG P+L+QHLF F HP VY+++L
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVL 284
Query: 463 PGFGIIS 483
P GI+S
Sbjct: 285 PAMGIVS 291
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 75.8 bits (178), Expect = 6e-13
Identities = 45/144 (31%), Positives = 64/144 (44%)
Frame = +1
Query: 82 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 261
A TG YPPL+ G VD I++L L+G+ + +
Sbjct: 166 AKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDM 225
Query: 262 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 441
P+F A+ +L DR L+ F GG+P++Y +LF +GHP
Sbjct: 226 PIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHP 285
Query: 442 EVYILILPGFGIISHIISQERGKK 513
EVYILILP FG+ S + S GK+
Sbjct: 286 EVYILILPAFGVFSEVTSTFAGKR 309
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 75.4 bits (177), Expect = 7e-13
Identities = 45/130 (34%), Positives = 61/130 (46%)
Frame = +1
Query: 103 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 282
YPPL+ G +D + IS+ S +++P+FV AV
Sbjct: 152 YPPLAGASFSPGLGLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAV 211
Query: 283 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 462
+ +F A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +
Sbjct: 212 LVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFI 270
Query: 463 PGFGIISHII 492
P G++S II
Sbjct: 271 PALGMVSSII 280
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 75.4 bits (177), Expect = 7e-13
Identities = 44/137 (32%), Positives = 65/137 (47%)
Frame = +1
Query: 100 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 279
+Y PLS++ G S D + + LA I+S S ++P+ +
Sbjct: 170 MYVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWY 229
Query: 280 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 459
+ TAF +L +R L FFD GGDP+L+QHLF FGHPEVYI+
Sbjct: 230 LLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIF 289
Query: 460 LPGFGIISHIISQERGK 510
LP G+++ ++ GK
Sbjct: 290 LPAAGMVATMLPTFVGK 306
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 74.9 bits (176), Expect = 1e-12
Identities = 45/143 (31%), Positives = 63/143 (44%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
++ G T Y PL+SN G + + L +AGI +
Sbjct: 157 VIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGM 216
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
+ ++P+F IT A+ +L DR FF GG P+L+ +LF
Sbjct: 217 TLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFW 276
Query: 427 FFGHPEVYILILPGFGIISHIIS 495
+GHPEVYI+ILP FGI S IIS
Sbjct: 277 IWGHPEVYIVILPAFGIFSEIIS 299
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 74.5 bits (175), Expect = 1e-12
Identities = 44/99 (44%), Positives = 50/99 (50%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 106 PPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFI 165
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 330
+ +LPLFV A+ +TA AG
Sbjct: 166 TTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 74.1 bits (174), Expect = 2e-12
Identities = 42/131 (32%), Positives = 61/131 (46%)
Frame = +1
Query: 100 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 279
+YPPL+ G + D + + IS+ S ++P+F A
Sbjct: 154 MYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWA 213
Query: 280 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 459
+ I A A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 214 MLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIF 273
Query: 460 LPGFGIISHII 492
LP G++S I+
Sbjct: 274 LPAAGLVSMIV 284
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 74.1 bits (174), Expect = 2e-12
Identities = 43/135 (31%), Positives = 61/135 (45%)
Frame = +1
Query: 88 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 267
+G +YPPLSS + G + D + + IS+ S ++P+
Sbjct: 140 SGWFMYPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPI 199
Query: 268 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 447
F +TA +L +R + FF A GGD +L+QHLF FGHPEV
Sbjct: 200 FAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEV 259
Query: 448 YILILPGFGIISHII 492
YI+ LP G IS I+
Sbjct: 260 YIIFLPAAGAISTIL 274
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 73.3 bits (172), Expect = 3e-12
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Frame = +1
Query: 100 VYPPLS-SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 276
+Y PLS + G +L +L L+G+SS + ++PLFV
Sbjct: 127 MYAPLSVETTVNYGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKVP--YLKMPLFVW 184
Query: 277 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 456
TA + +R T FFD A GG P+L+Q LF FFGHPEVYIL
Sbjct: 185 GFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYIL 244
Query: 457 ILPGFGIISHII 492
ILP G++S ++
Sbjct: 245 ILPAMGLVSELL 256
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 72.9 bits (171), Expect = 4e-12
Identities = 55/155 (35%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +1
Query: 85 GTG*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 258
G G T+YPP + S + + L + SL L I + +
Sbjct: 151 GAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMR 210
Query: 259 LPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA----------GGGDPI 405
LPL V + T G++ +LL DR L TSFF P GGG P+
Sbjct: 211 LPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPL 269
Query: 406 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 510
L+QHLF FFGHPEVYI+ LP FGI+S +IS K
Sbjct: 270 LFQHLFWFFGHPEVYIVALPAFGIVSDLISTHARK 304
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 71.3 bits (167), Expect = 1e-11
Identities = 42/135 (31%), Positives = 61/135 (45%)
Frame = +1
Query: 88 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 267
+G +YPPL+S + G + D + + IS+ S D++P+
Sbjct: 140 SGWFMYPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPI 199
Query: 268 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 447
+ +TA +L +R FF A GGD +L+QHLF FGHPEV
Sbjct: 200 YGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEV 259
Query: 448 YILILPGFGIISHII 492
YI+ LP G IS I+
Sbjct: 260 YIIFLPAAGAISTIL 274
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 109 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 288
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 289 TAFXXXXXXXXXAGAITILLTDR 357
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 70.5 bits (165), Expect = 2e-11
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +1
Query: 256 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 435
++P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FG
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFG 259
Query: 436 HPEVYILILPGFGIISHII 492
HPEVYILILP GIIS +I
Sbjct: 260 HPEVYILILPAMGIISEVI 278
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 70.5 bits (165), Expect = 2e-11
Identities = 45/136 (33%), Positives = 58/136 (42%)
Frame = +1
Query: 103 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 282
YPP + + + G VD I+SL LA + S +PLF
Sbjct: 193 YPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTA 252
Query: 283 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 462
TA L DR L+ FF GG+ + + ++F FGHPEVYILIL
Sbjct: 253 LCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILIL 312
Query: 463 PGFGIISHIISQERGK 510
P FG+ S I S GK
Sbjct: 313 PAFGVYSEIFSTFSGK 328
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 70.5 bits (165), Expect = 2e-11
Identities = 40/135 (29%), Positives = 64/135 (47%)
Frame = +1
Query: 91 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 270
G T Y P S A VD + ++ L G SS S ++P++
Sbjct: 138 GWTFYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIY 194
Query: 271 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 450
V +V + A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY
Sbjct: 195 VWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVY 254
Query: 451 ILILPGFGIISHIIS 495
+++LP GI++ + S
Sbjct: 255 VMLLPYLGILAEVAS 269
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 69.3 bits (162), Expect = 5e-11
Identities = 39/129 (30%), Positives = 60/129 (46%)
Frame = +1
Query: 106 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 285
PPL++ G + D + + IS+ + ++P+F A+
Sbjct: 215 PPLTTETYSPGYNADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAML 274
Query: 286 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 465
+ A A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 275 VFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLP 334
Query: 466 GFGIISHII 492
G++S I+
Sbjct: 335 AAGMVSMIV 343
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 66.1 bits (154), Expect = 4e-10
Identities = 44/143 (30%), Positives = 63/143 (44%)
Frame = +1
Query: 67 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 246
I+ A TG YPPLS VD +S+ ++GI +
Sbjct: 156 IIGEFAKTGWLGYPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKL 215
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 426
F+++ +F+ + + + DR L+T F+ GG +LY +L
Sbjct: 216 FFNKISIFMWTCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIW 275
Query: 427 FFGHPEVYILILPGFGIISHIIS 495
+GHPEVYILILP FGI S IIS
Sbjct: 276 AWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 66.1 bits (154), Expect = 4e-10
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Frame = +1
Query: 97 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 276
T YPP S I H + FS+ L G +S +++L +FV
Sbjct: 130 TGYPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVW 186
Query: 277 AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 453
A + AF G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY+
Sbjct: 187 AT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYV 245
Query: 454 LILPGFGIISHIIS 495
+ LP ++ I++
Sbjct: 246 IFLPFMAMVFEIVA 259
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.9 bits (151), Expect = 1e-09
Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Frame = +1
Query: 247 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------G 393
S ++P+ A IT+ A +L DR TSFF P+G G
Sbjct: 214 SLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGG 273
Query: 394 GDPILYQHLF*FFGHPEVYILILPGFGIISHII 492
G +L+QHLF FFGHPEVYI ILP GI+SHI+
Sbjct: 274 GSALLWQHLFWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 63.3 bits (147), Expect = 3e-09
Identities = 47/132 (35%), Positives = 54/132 (40%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 213
PP L + G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 96 PPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFL 155
Query: 214 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 393
++ LF A AIT+L R N SFF P
Sbjct: 156 VTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXX 215
Query: 394 GDPILYQHLF*F 429
G P + F F
Sbjct: 216 GXPXXFPTFFXF 227
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 62.9 bits (146), Expect = 4e-09
Identities = 37/135 (27%), Positives = 58/135 (42%)
Frame = +1
Query: 88 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 267
+G +YPPL++ G D+ + L ++S + +PL
Sbjct: 168 SGWFMYPPLATQ--DEGLGSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPL 225
Query: 268 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 447
+ V + + +R + FFDP GGDP+L+QHLF FGHPEV
Sbjct: 226 YAWYVLVVGGMILFAFPPLIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEV 285
Query: 448 YILILPGFGIISHII 492
YI+ LP + + I+
Sbjct: 286 YIIFLPLIALAAMIV 300
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 61.3 bits (142), Expect = 1e-08
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = +1
Query: 34 PPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 189
PP L +VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 1 PPSLLLYVISSMVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 60.9 bits (141), Expect = 2e-08
Identities = 43/136 (31%), Positives = 61/136 (44%)
Frame = +1
Query: 88 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 267
TG TVY PLSS D A ++ L GI + LPL
Sbjct: 154 TGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPL 213
Query: 268 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 447
FV AV A G +LL ++ S++ GG +++++LF +FGHPEV
Sbjct: 214 FVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEV 272
Query: 448 YILILPGFGIISHIIS 495
Y+L+LPG G + +S
Sbjct: 273 YLLLLPGTGAMFDYLS 288
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +1
Query: 331 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 492
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 59.7 bits (138), Expect = 4e-08
Identities = 31/55 (56%), Positives = 34/55 (61%)
Frame = +1
Query: 1 PIRHEEXFDSYPPPLYY*FQXRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 165
P + F PP L +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 59.7 bits (138), Expect = 4e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 270 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 437
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.4 bits (135), Expect = 9e-08
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1
Query: 253 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 432
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 433 GHPEVYILIL 462
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 57.2 bits (132), Expect = 2e-07
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +1
Query: 427 FFGHPEVYILILPGFGIISHIISQERGKKE 516
FFGHPEVYILILPGFG+ISHI++ GKKE
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKE 31
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 56.8 bits (131), Expect = 3e-07
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 14/153 (9%)
Frame = +1
Query: 79 GAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 249
G G T YP L+ G + + + G SS +
Sbjct: 159 GPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTIINMRAPGMT 218
Query: 250 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------GG 396
F +LP+ + + ITA + + DR T FF P+G GG
Sbjct: 219 FFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGG 278
Query: 397 DPILYQHLF*FFGHPEVYILILPGFGIISHIIS 495
P+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 279 QPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 55.6 bits (128), Expect = 6e-07
Identities = 36/135 (26%), Positives = 57/135 (42%)
Frame = +1
Query: 91 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 270
G T Y PL+ + G SV + L+ G+ S ++P+F
Sbjct: 145 GWTFYYPLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVF 202
Query: 271 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 450
++ T+ A + + L S F+P GG P+LYQ F F+ HP VY
Sbjct: 203 AWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVY 262
Query: 451 ILILPGFGIISHIIS 495
+++LP GI + + S
Sbjct: 263 VMLLPYLGIGAEVAS 277
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Frame = +1
Query: 259 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 405
+P+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 406 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 513
L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR 287
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1
Query: 442 EVYILILPGFGIISHIISQERGKKE 516
EVYILILPGFG+ISHIISQE GKKE
Sbjct: 155 EVYILILPGFGMISHIISQESGKKE 179
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 49.2 bits (112), Expect = 6e-05
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 414 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKK 512
+ ++IFW+S SLYFN IWYNF YY+T K K
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGK 34
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 1e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 273 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 425
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 7e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 427 FFGHPEVYILILPGFGIISHI 489
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 37.9 bits (84), Expect = 0.14
Identities = 34/138 (24%), Positives = 50/138 (36%)
Frame = +1
Query: 79 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 258
G TG YPPL+ N G + + ++S S +
Sbjct: 218 GFQTGWWGYPPLAQN---SGSGIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGR 274
Query: 259 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 438
+P+FV + A + L+D + F+ G P+ Y F F H
Sbjct: 275 VPIFVWGLFAAATTLVVESPATYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFH 333
Query: 439 PEVYILILPGFGIISHII 492
PEVY+ ILP F I I+
Sbjct: 334 PEVYVFILPAFAIWLEIL 351
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.24
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 136 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 315
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 316 XXXAGAITILLTDRNLNT 369
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 0.72
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 391 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 507
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 439 PEVYILILPGFGIISHIISQERGKK 513
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 1.3
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 397 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 510
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 403 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 510
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.1 bits (72), Expect = 3.9
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 285 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 464
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 465 RI 470
I
Sbjct: 154 SI 155
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 3.9
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 136 GRSVDLAIFSLHLAGISS 189
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 5.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2
Query: 356 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 234
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 5.1
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -2
Query: 410 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 273
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_Q60AP6 Cluster: Putative membrane protein; n=1;
Methylococcus capsulatus|Rep: Putative membrane protein
- Methylococcus capsulatus
Length = 263
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +1
Query: 382 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 495
PA GG P + HL G Y LI GFG+I I S
Sbjct: 39 PASGGRPTPFSHLLYGTGKTLSYTLIGAGFGLIGSIFS 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,037,954
Number of Sequences: 1657284
Number of extensions: 7319551
Number of successful extensions: 17273
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 15818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17083
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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