Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30391
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32050.1 68417.m04562 neurochondrin family protein contains P... 69 2e-12
At3g26850.2 68416.m03359 expressed protein 32 0.26
At3g26850.1 68416.m03358 expressed protein 32 0.26
At3g01810.1 68416.m00123 expressed protein 28 4.3
At1g70680.1 68414.m08148 caleosin-related family protein similar... 27 5.7
At1g48310.1 68414.m05396 SNF2 domain-containing protein / helica... 27 5.7
At1g79720.1 68414.m09298 aspartyl protease family protein contai... 27 7.5
At3g28380.1 68416.m03546 P-glycoprotein, putative similar to P-g... 27 9.9
>At4g32050.1 68417.m04562 neurochondrin family protein contains Pfam
PF05536: Neurochondrin
Length = 618
Score = 68.9 bits (161), Expect = 2e-12
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Frame = +2
Query: 23 SEPIKKCILILKNARSDTEKFAALFMVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSN 202
S + C+ +LK R D ++ A L +VTK K+ D S K ++EA+G FL +L +
Sbjct: 10 SPSLDDCLKLLKGER-DEQRLAGLLLVTKFCKNDDIVSLNK--VYEAVGTHFLDRLFRTG 66
Query: 203 SVEDDCPPS--VYKSVALSVLTNFCNEPELATHPEMLANIPVFLDIVQTSXXXXXXXXLI 376
S D + VY ++++VL FC PE+A+ EM++ IP+ L+++
Sbjct: 67 SGSGDGVDNRDVYLQISITVLAAFCRVPEIASSEEMVSRIPLILEVMSKGITTN------ 120
Query: 377 IISEAYTCLQCIAEH-EAGQRALIDVGAIK 463
++ + Y L ++ EAG LI+ G ++
Sbjct: 121 MLEDCYELLYLVSTACEAGLMTLINSGGLR 150
>At3g26850.2 68416.m03359 expressed protein
Length = 265
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +2
Query: 116 KSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNEPELATH 295
KSK+ +S+ LF+ + +F+K LL + + + +K++ V+ N E
Sbjct: 174 KSKERDSSRSMKLFKVVLTKFVKDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRI 233
Query: 296 PEMLANIPVFLDIVQ 340
P+ A I ++D Q
Sbjct: 234 PKSRAKIDKYIDSSQ 248
>At3g26850.1 68416.m03358 expressed protein
Length = 265
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +2
Query: 116 KSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNEPELATH 295
KSK+ +S+ LF+ + +F+K LL + + + +K++ V+ N E
Sbjct: 174 KSKERDSSRSMKLFKVVLTKFVKDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRI 233
Query: 296 PEMLANIPVFLDIVQ 340
P+ A I ++D Q
Sbjct: 234 PKSRAKIDKYIDSSQ 248
>At3g01810.1 68416.m00123 expressed protein
Length = 921
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 89 ALFMVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNF 268
AL + L K NS+ +K + G +K++L + ++ CP V +V S+ +
Sbjct: 760 ALSDLMMLPKDMLLNSSVRKEVCPMFGAPLIKRVLNNFVPDEFCPDPVPDAVLKSLESEE 819
Query: 269 CNEPELATHPEMLANIPVFLDIVQTS 346
E + T A PV+ +TS
Sbjct: 820 EAEKSIITSYPCTAPSPVYCPPSRTS 845
>At1g70680.1 68414.m08148 caleosin-related family protein similar to
Ca+2-binding EF hand protein GB:AAB71227 [Glycine max];
contains Pfam profilePF05042: Caleosin related protein
Length = 192
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 158 EAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNEPELATHPEML 307
+A+ + LK+LL +N +DC + VL N C + H E++
Sbjct: 122 DALTSKELKELLKANREPNDCKGGILAFGEWKVLYNLCKDKSGLLHKEIV 171
>At1g48310.1 68414.m05396 SNF2 domain-containing protein / helicase
domain-containing protein contains similarity to
DNA-dependent ATPase A GI:6651385 from [Bos taurus]};
contains PFam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2
Length = 673
Score = 27.5 bits (58), Expect = 5.7
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 47 LILKNARSDTEKFAALFMVTKLVKS--KDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDC 220
+ L A D ++ ALF K+VKS KDC S + I + K+ T ++V
Sbjct: 412 VFLDLAAKDMKQINALFHELKVVKSKIKDCISEDDIKSLKFIEKNLINKIYTDSAVAK-- 469
Query: 221 PPSVYKSVALSVLTNFCNEPELATHPEMLANIPVFL 328
P+V + +V+ C A H ML + FL
Sbjct: 470 IPAVLDYLE-NVIEAGCKFLVFAHHQSMLEELHQFL 504
>At1g79720.1 68414.m09298 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 484
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 188 LLTSNSVEDDCPPSVYKSVALSVLTNFCNEP 280
L+ S +V PPS+YK+V + L F P
Sbjct: 357 LIDSGTVITRLPPSIYKAVKIEFLKQFSGFP 387
>At3g28380.1 68416.m03546 P-glycoprotein, putative similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1240
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 75 VSLLAFFKMSMHFLIGSDTSPIVTN 1
+SL FK S H IGS +S IVTN
Sbjct: 618 MSLSKDFKYSQHNSIGSTSSSIVTN 642
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,763,874
Number of Sequences: 28952
Number of extensions: 205952
Number of successful extensions: 415
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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