Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30389
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.9  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   8.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -1

Query: 288 VFLFKEMGSNITEAIEVDLPTVFRIVFIDECLK 190
           +FL   +GS +   I +D        F+D C K
Sbjct: 674 IFLLLTLGSLLQMVISMDSTVEEAKTFVDRCYK 706


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = +1

Query: 64  EQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINF 243
           EQK      AF++  T      +  + ST + +  ++  +   +   D N+  N  + N 
Sbjct: 413 EQKSRRKGPAFKVDPTQVESEEEDEETSTTVFSNVEVVQEEAKKEESDSNNNNNKEEGNS 472

Query: 244 DGFCNIA 264
             +CNIA
Sbjct: 473 CQYCNIA 479


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 175 FDDSELQALIDENDP 219
           FDD+ ++   D+NDP
Sbjct: 42  FDDAFIRTSEDDNDP 56


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 175 FDDSELQALIDENDP 219
           FDD+ ++   D+NDP
Sbjct: 356 FDDAFIRTSEDDNDP 370


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 175 FDDSELQALIDENDP 219
           FDD+ ++   D+NDP
Sbjct: 589 FDDAFIRTSEDDNDP 603


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 175 FDDSELQALIDENDP 219
           FDD+ ++   D+NDP
Sbjct: 589 FDDAFIRTSEDDNDP 603


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,196
Number of Sequences: 336
Number of extensions: 2014
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)