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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30389
         (516 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch...   106   2e-24
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma...    71   8e-14
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces...    70   2e-13
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce...    60   3e-10
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha...    36   0.004
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb...    35   0.006
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch...    34   0.011
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po...    32   0.044
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo...    32   0.059
SPAC23C11.01 |||ER membrane protein, ICE2 family|Schizosaccharom...    29   0.31 
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi...    28   0.72 
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha...    28   0.95 
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha...    28   0.95 
SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||...    27   1.3  
SPBP35G2.12 |||nucleoside diphosphate-sugar hydrolase |Schizosac...    25   5.1  
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn...    25   5.1  
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo...    25   6.7  
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz...    25   6.7  
SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual       25   8.9  
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces...    25   8.9  
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb...    25   8.9  
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe...    25   8.9  
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo...    25   8.9  
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c...    25   8.9  

>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 150

 Score =  106 bits (254), Expect = 2e-24
 Identities = 47/144 (32%), Positives = 93/144 (64%)
 Frame = +1

Query: 64  EQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINF 243
           ++++A  R+AF +FD  + G I   ++  ++ ++GQ    +ELQ +I+E D + +G I+F
Sbjct: 8   DEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDF 67

Query: 244 DGFCNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEILAALDDKLSNADLD 423
             F  + +  +++ D E   +E++EAF+++D++GNGYIT   L  +L +L ++LS  ++ 
Sbjct: 68  TEFLTMMARKMKDTDNE---EEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVA 124

Query: 424 GIIAEIDTDGSGTVDFDEFMEMMT 495
            +I E DTDG G ++++EF  +++
Sbjct: 125 DMIREADTDGDGVINYEEFSRVIS 148



 Score = 26.6 bits (56), Expect = 2.2
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
 Frame = +1

Query: 76  AMLRKAFQMFDTTKSGYIDVLKISTIL-NTMGQLFDDSELQALIDENDPENSGKINFDGF 252
           A L+      D   +G ID  +  T++   M    ++ E++      D + +G I  +  
Sbjct: 48  AELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEEL 107

Query: 253 CNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEILAA 390
               +H L        Q+E+ +  R  D +G+G I       ++++
Sbjct: 108 ----THVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVISS 149


>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 176

 Score = 71.3 bits (167), Expect = 8e-14
 Identities = 35/143 (24%), Positives = 74/143 (51%)
 Frame = +1

Query: 64  EQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINF 243
           E++   + +AF++FD+ K   ID  ++   +  +G   + SE+  ++ + D    G +  
Sbjct: 33  EEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQM 92

Query: 244 DGFCNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEILAALDDKLSNADLD 423
           + F  + +  + E D     +E+K AF L+D +  G I+   L+ +   L++ + + +L+
Sbjct: 93  EDFVRVMTEKIVERDP---LEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELE 149

Query: 424 GIIAEIDTDGSGTVDFDEFMEMM 492
            +I E D D  G ++  EF+ +M
Sbjct: 150 AMIEEFDLDQDGEINEQEFIAIM 172



 Score = 42.3 bits (95), Expect = 4e-05
 Identities = 20/74 (27%), Positives = 39/74 (52%)
 Frame = +1

Query: 274 LEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEILAALDDKLSNADLDGIIAEIDTDG 453
           L  E  E  +Q++ EAF+L+D + +  I    L+  + AL      +++  I+ + D  G
Sbjct: 27  LRVEITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTG 86

Query: 454 SGTVDFDEFMEMMT 495
            G +  ++F+ +MT
Sbjct: 87  KGYLQMEDFVRVMT 100


>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 143

 Score = 69.7 bits (163), Expect = 2e-13
 Identities = 42/146 (28%), Positives = 80/146 (54%)
 Frame = +1

Query: 49  MDSDDEQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENS 228
           M +  EQ   M ++AF ++D  K G I    + ++L ++G    D+EL  L +E      
Sbjct: 1   MPASKEQTDEM-KEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----G 55

Query: 229 GKINFDGFCNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEILAALDDKLS 408
             I+   F +  S+ L E ++E   +E  +AFR++D++ +GYI T+   + +  L +KLS
Sbjct: 56  DAIDEKKFMSFVSNKLRETESE---EEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLS 112

Query: 409 NADLDGIIAEIDTDGSGTVDFDEFME 486
           + ++  ++ E D   SG+ D+ +F++
Sbjct: 113 DNEVQLMVQEADPTNSGSFDYYDFVQ 138


>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 174

 Score = 59.7 bits (138), Expect = 3e-10
 Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
 Frame = +1

Query: 55  SDDEQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGK 234
           S   +++  +RK F   D  +SG ID  +  +I +        S L +++DE   +  G 
Sbjct: 17  SFSNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLA-SRLFSVVDE---DGGGD 72

Query: 235 INFDGFCNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEILAAL------D 396
           ++F  F N  S F    + E   ++LK AF++YD + +GYI+   L  +L  +      +
Sbjct: 73  VDFQEFINSLSVFSVHGNKE---EKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLRE 129

Query: 397 DKLSNADLDGIIAEIDTDGSGTVDFDEFMEMMTG 498
           D+L    +D  I E+D D  G + F+EF ++++G
Sbjct: 130 DQLQQI-VDKTIMEVDKDRDGKISFEEFKDIVSG 162


>SPAC926.03 |rlc1||myosin II regulatory light chain
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 184

 Score = 35.9 bits (79), Expect = 0.004
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +1

Query: 304 QELKEAFRLYDREGNGYITTSTLKEILAALDDKLSNADLDGIIAEID 444
           QELKEAF L D++G+G I    +K +L +L+   S   ++ +   I+
Sbjct: 48  QELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESIN 94


>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 141

 Score = 35.1 bits (77), Expect = 0.006
 Identities = 18/60 (30%), Positives = 35/60 (58%)
 Frame = +1

Query: 313 KEAFRLYDREGNGYITTSTLKEILAALDDKLSNADLDGIIAEIDTDGSGTVDFDEFMEMM 492
           K+AF L+DR G G I  +++ ++L A     + A+    I EI++     VD ++F++++
Sbjct: 9   KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDMEQFLQVL 64


>SPAC1687.14c |||EF hand family protein, unknown
           role|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 76

 Score = 34.3 bits (75), Expect = 0.011
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = +1

Query: 298 MQQELKEAFRLYDREGNGYITTSTLKEILAALDDKLSNADLDGIIAEIDTDGSGTVDFDE 477
           M +E +EAF L+D    GYI    L+   A L + L+   L  ++    T+G   V  +E
Sbjct: 10  MDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGTNGK--VSREE 67

Query: 478 FMEM 489
           F E+
Sbjct: 68  FAEL 71



 Score = 32.7 bits (71), Expect = 0.033
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +1

Query: 88  KAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINFDGFCNIAS 267
           +AF +FD T  GYID   +      +G+     +LQ ++D      +GK++ + F  +  
Sbjct: 16  EAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDL--AGTNGKVSREEFAELWI 73

Query: 268 H 270
           H
Sbjct: 74  H 74


>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 670

 Score = 32.3 bits (70), Expect = 0.044
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 280 EEDAEAMQQELKEAFRLYDREGNGYITTSTLKE 378
           ++D   M Q LKE    Y+ E N  IT+ TLKE
Sbjct: 522 KDDLTEMNQRLKEQIESYENEVNSEITSRTLKE 554


>SPBC11G11.02c |end3||actin cortical patch component End3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 375

 Score = 31.9 bits (69), Expect = 0.059
 Identities = 22/55 (40%), Positives = 29/55 (52%)
 Frame = +1

Query: 316 EAFRLYDREGNGYITTSTLKEILAALDDKLSNADLDGIIAEIDTDGSGTVDFDEF 480
           E FR  + E NGY++ S    +L +   KLS+  L+ I    D D  G  DFDEF
Sbjct: 11  EIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFDFDEF 62


>SPAC23C11.01 |||ER membrane protein, ICE2
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 441

 Score = 29.5 bits (63), Expect = 0.31
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +1

Query: 136 LKISTILNTMGQLFDDSELQALIDENDPENSGKINFDGFCNIASHF 273
           + +ST+ +T  +  DDS L+ +ID+  PE  GK       NI++HF
Sbjct: 12  ISVSTVEDTSFEAMDDSILE-IIDDEAPEIQGKPK----ANISTHF 52


>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
           Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 190

 Score = 28.3 bits (60), Expect = 0.72
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
 Frame = +1

Query: 61  DEQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSEL-QALIDENDPENSGKI 237
           D++++    K F  F    SG+++  +   I        D S   + + +  D + +G I
Sbjct: 23  DKKELQQWYKGF--FKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYI 80

Query: 238 NFDGFCNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEILAAL 393
           +F  F    S     E    +  +L  AF+LYD + NG I+   +  I+ A+
Sbjct: 81  DFKEFICALSVTSRGE----LNDKLIWAFQLYDLDNNGLISYDEMLRIVDAI 128


>SPBC14F5.12c |cbh2||centromere binding protein
           Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 514

 Score = 27.9 bits (59), Expect = 0.95
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
 Frame = +1

Query: 130 DVLKISTILNTM-GQLFDDSELQALIDENDP--ENSGKINFDGFCNIASHFLEEEDAEAM 300
           + ++I+  L  + G+   D ++  + +  +P  ENS   N D    +A+ FL+E + E  
Sbjct: 402 ETIRIAVNLQELIGKYLGDKDIFQIENFINPIEENSADTNDDIVNQVAAQFLDEREFETD 461

Query: 301 QQELKEAFRLYDREGNGYITT 363
           ++E +  + L  ++    I T
Sbjct: 462 EEEEESQYLLSTKDAINAINT 482


>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
           Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 884

 Score = 27.9 bits (59), Expect = 0.95
 Identities = 29/116 (25%), Positives = 44/116 (37%)
 Frame = +1

Query: 145 STILNTMGQLFDDSELQALIDENDPENSGKINFDGFCNIASHFLEEEDAEAMQQELKEAF 324
           ST  + + ++  D+  Q+ +D     +S     D   NI +    E+ +   Q      F
Sbjct: 256 STKSSKLDEISADNNAQSAVDNK--YSSPPQTIDPQANIKALITPEDRSNFYQ-----LF 308

Query: 325 RLYDREGNGYITTSTLKEILAALDDKLSNADLDGIIAEIDTDGSGTVDFDEFMEMM 492
              D E  GYI          A    L + +L  I   +DT   G +D DEF   M
Sbjct: 309 SKIDNENKGYIVGGEAVPFFMA--SHLDSEELARIWDTVDTQDRGYIDKDEFAVAM 362


>SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 418

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 15/68 (22%), Positives = 29/68 (42%)
 Frame = +1

Query: 202 IDENDPENSGKINFDGFCNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEI 381
           + E        + F  F + ++     +D  A+ Q +  +F   +R G G I T    ++
Sbjct: 343 VSEESQVEPNTLIFQNFSSPSTSLSAPKDTPAVIQSINTSFLNNERAGRGNIKTVDQNQL 402

Query: 382 LAALDDKL 405
           +  + DKL
Sbjct: 403 INRIVDKL 410


>SPBP35G2.12 |||nucleoside diphosphate-sugar hydrolase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 205

 Score = 25.4 bits (53), Expect = 5.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 337 REGNGYITTSTLKEILAALDDKLSNADLDGIIAEID 444
           RE  GY+ T      +   D  L+NA+L  I+A+ID
Sbjct: 107 REETGYVGTVMDSTTVMYNDPGLTNANLKIILADID 142


>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
           synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 534

 Score = 25.4 bits (53), Expect = 5.1
 Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
 Frame = +1

Query: 202 IDENDPENSGKINFDGFCNIASHFLEEEDAEAMQQ---ELKEAFRLYDREGNGYITTSTL 372
           I +N P  +  IN +    ++     EE  E         KE   LY+++  G++   + 
Sbjct: 181 IMKNSPMPAEPINKENINQLSRSLFYEEGKEFWDDYDIAAKEILSLYEQDPEGFVNPYSK 240

Query: 373 KEILAALDDKLSNADLDGIIAEI--DTDGSGTVDFDEFME 486
           +   A  + + +     G+ A+   D D   +   +EF++
Sbjct: 241 RGAAALANSENNKGSEAGVSAKTNPDMDSDSSAIVNEFLK 280


>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1183

 Score = 25.0 bits (52), Expect = 6.7
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 328  LYDREGNGYITT-STLKEILAALDDKLSNADLDGII 432
            LYD+E  GY+T   +  E++  + D+  N D + ++
Sbjct: 1055 LYDKEKRGYVTLFPSGSEVVQFVPDRTYNIDSEYVV 1090


>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 665

 Score = 25.0 bits (52), Expect = 6.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 238 NFDGFCNIASHFLEEEDAEAM 300
           + DGF ++ASHF     AE++
Sbjct: 269 SIDGFVSVASHFSSASTAESL 289


>SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 533

 Score = 24.6 bits (51), Expect = 8.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 208 ENDPENSGKINFDGFCNIASHFLEEEDAEAMQQELKEAFR 327
           E D EN   ++       A   LE+ED EAM  +L+E  R
Sbjct: 152 EIDKENLAVLSQKSVLKTAEE-LEKEDREAMSAKLQELIR 190


>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 3131

 Score = 24.6 bits (51), Expect = 8.9
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 205 DENDPENSGKINFDGFCNIASHFLEEEDAEAMQQELKEAFRLYDR 339
           D N+PE+       GF +I S  +E  D E+  +       +YDR
Sbjct: 645 DCNNPESFSLFVDAGFISITSQNVETNDKESNSESETLYHLIYDR 689


>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1379

 Score = 24.6 bits (51), Expect = 8.9
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -2

Query: 488 ISMNSSKSTVPEPSVS 441
           +S+ SS +T+P+PSVS
Sbjct: 440 LSLKSSDATIPKPSVS 455


>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 504

 Score = 24.6 bits (51), Expect = 8.9
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 109 TTKSGYIDVLKISTILNTMGQLFDDSE 189
           TTKS +I++   ST +    ++F+DS+
Sbjct: 143 TTKSRFIEISATSTTVADCRKIFEDSQ 169


>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 830

 Score = 24.6 bits (51), Expect = 8.9
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -1

Query: 144 DLQHVDVTRLRGVKHLECFTQHGHLLFIIGIHVARQGLAAVTRTEXRM 1
           D Q  D T +RG++    F+Q    L II +H+ + G+  V R + RM
Sbjct: 659 DEQEEDDT-VRGLRKTIIFSQFTTFLDIIDLHLRKAGIGFV-RYDGRM 704


>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 577

 Score = 24.6 bits (51), Expect = 8.9
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 155 STQWDSCSMTQNFKHSSMKTIRKTVGRSTSMASVILLPISLKRKTLKPCN 304
           S Q D  +  + +K +    I    G S ++  +  LP SL    +KPCN
Sbjct: 356 SYQSDLVAAIKKYKINLRSLIIIDEGVSNTVKDLAFLPQSLTTLIVKPCN 405


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,976,033
Number of Sequences: 5004
Number of extensions: 38001
Number of successful extensions: 163
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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