Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30384
         (424 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...    83   3e-15
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...    82   4e-15
UniRef50_Q9LIR5 Cluster: Genomic DNA, chromosome 3, BAC clone:F1...    32   5.6  
UniRef50_A1ICD6 Cluster: Putative uncharacterized protein; n=1; ...    31   7.4  
UniRef50_A2FQ39 Cluster: Putative uncharacterized protein; n=1; ...    31   9.7  

>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score = 82.6 bits (195), Expect = 3e-15
 Identities = 39/59 (66%), Positives = 42/59 (71%)
 Frame = +2

Query: 170 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVS 346
           P    EGEGDPEFIKRQDQKRSDLD+QLKEYI EWRKQR+            QAKRKV+
Sbjct: 26  PQTPAEGEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKEEDELKKLKEKQAKRKVT 84


>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score = 82.2 bits (194), Expect = 4e-15
 Identities = 39/60 (65%), Positives = 42/60 (70%)
 Frame = +2

Query: 167 TPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVS 346
           T    +EG GDPEFIKRQDQKRSDLDEQL+EYI EWRKQRA            QAKRK+S
Sbjct: 26  TTTKVEEGAGDPEFIKRQDQKRSDLDEQLREYITEWRKQRAKEEDELKKLKEKQAKRKIS 85


>UniRef50_Q9LIR5 Cluster: Genomic DNA, chromosome 3, BAC
           clone:F14O13; n=2; Arabidopsis thaliana|Rep: Genomic
           DNA, chromosome 3, BAC clone:F14O13 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 224

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 179 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQR 286
           K +  G    IK +D++   +  QLKE   EWRK+R
Sbjct: 21  KDQSRGRRHLIKERDEREKVMFLQLKEAEREWRKER 56


>UniRef50_A1ICD6 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
           uncharacterized protein - Candidatus Desulfococcus
           oleovorans Hxd3
          Length = 259

 Score = 31.5 bits (68), Expect = 7.4
 Identities = 10/36 (27%), Positives = 24/36 (66%)
 Frame = +2

Query: 182 QEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRA 289
           QEG+    F+++  +K +++D+ +  Y+ +W +Q+A
Sbjct: 7   QEGQVQWAFVRQHRRKGTEIDQMIGGYMRDWEQQKA 42


>UniRef50_A2FQ39 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1764

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 10/29 (34%), Positives = 23/29 (79%)
 Frame = +2

Query: 203  EFIKRQDQKRSDLDEQLKEYINEWRKQRA 289
            +F+K+ ++K  +L +QLK+Y+ ++ KQ++
Sbjct: 1196 QFVKKTNEKNKELADQLKDYLLKFTKQKS 1224


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,432,939
Number of Sequences: 1657284
Number of extensions: 4407500
Number of successful extensions: 12484
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12475
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)