Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30383
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   1.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   1.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.5  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   6.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.6  

>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +2

Query: 14  VVTLSILCSRIYIYTPVCKNEKSRKKN---LYFYWW*DLL*VRT 136
           +V +S     ++I   +  + +  K N   +YFYW    L VRT
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFLIVRT 333


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +2

Query: 14  VVTLSILCSRIYIYTPVCKNEKSRKKN---LYFYWW*DLL*VRT 136
           +V +S     ++I   +  + +  K N   +YFYW    L VRT
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFLIVRT 333


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 68  KNEKSRKKNLYFY 106
           KN+ S+KK  Y+Y
Sbjct: 231 KNDSSKKKTRYYY 243


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 23  LSILCSRIYIYTPVCKN 73
           L I C RIY     CKN
Sbjct: 784 LEIKCKRIYNEKQCCKN 800


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 241 YKF*GLNYSYNGC 203
           Y F G  Y Y GC
Sbjct: 17  YPFQGTTYKYTGC 29


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 295 WLLEPIDIYNVNAPPTLRYK 236
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 118 PLVSPHG*VPPP 153
           P V PH  VPPP
Sbjct: 12  PTVLPHQEVPPP 23


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 197 GGAAVVTIIETLEFISQGGWRI 262
           G A ++   E +E   +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,859
Number of Sequences: 336
Number of extensions: 2897
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)