Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30380
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 87 1e-18
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 46 3e-06
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 46 3e-06
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 44 1e-05
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 34 0.011
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 31 0.10
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 27 1.3
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 26 3.8
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 25 6.7
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 25 8.9
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 87.0 bits (206), Expect = 1e-18
Identities = 44/135 (32%), Positives = 76/135 (56%)
Frame = +1
Query: 67 RIAVLRKAFFGFDHNRSGSIPCDFVADILRMMGXPFNXKILEELIEEVDADXSGRLEFPE 246
+IA R+AF FD ++ G+I + + ++R +G L+++I EVDAD +G ++F E
Sbjct: 10 QIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTE 69
Query: 247 FVTLAAKFIVEEDAEAXXXELREAFRLYDKEGNGXXPTSSLREIXXXXXXXXXXXXXXXX 426
F+T+ A+ + + D E E+REAF+++DK+GNG L +
Sbjct: 70 FLTMMARKMKDTDNE---EEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADM 126
Query: 427 IQEIDTDGSGTVDFD 471
I+E DTDG G ++++
Sbjct: 127 IREADTDGDGVINYE 141
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 46.0 bits (104), Expect = 3e-06
Identities = 30/130 (23%), Positives = 59/130 (45%)
Frame = +1
Query: 79 LRKAFFGFDHNRSGSIPCDFVADILRMMGXPFNXKILEELIEEVDADXSGRLEFPEFVTL 258
+++AF +D ++ G IP V +LR +G L +L E+ ++ +F++
Sbjct: 11 MKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAIDEKKFMSF 66
Query: 259 AAKFIVEEDAEAXXXELREAFRLYDKEGNGXXPTSSLREIXXXXXXXXXXXXXXXXIQEI 438
+ + E ++E E +AFR++DK+ +G T+ + +QE
Sbjct: 67 VSNKLRETESEE---EYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEA 123
Query: 439 DTDGSGTVDF 468
D SG+ D+
Sbjct: 124 DPTNSGSFDY 133
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 304 ELREAFRLYDKEGNGXXPTSSLREI 378
E++EAF LYD + +G PTS + +
Sbjct: 10 EMKEAFVLYDIDKDGLIPTSHVGSV 34
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 46.0 bits (104), Expect = 3e-06
Identities = 29/129 (22%), Positives = 55/129 (42%)
Frame = +1
Query: 79 LRKAFFGFDHNRSGSIPCDFVADILRMMGXPFNXKILEELIEEVDADXSGRLEFPEFVTL 258
+ +AF FD ++ +I + +R +G + +++ + D G L+ +FV +
Sbjct: 39 INEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRV 98
Query: 259 AAKFIVEEDAEAXXXELREAFRLYDKEGNGXXPTSSLREIXXXXXXXXXXXXXXXXIQEI 438
+ IVE D E++ AF L+D + G +LR + I+E
Sbjct: 99 MTEKIVERD---PLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEF 155
Query: 439 DTDGSGTVD 465
D D G ++
Sbjct: 156 DLDQDGEIN 164
Score = 34.3 bits (75), Expect = 0.011
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 79 LRKAFFGFDHNRSGSIPCDFVADILRMMGXPFNXKILEELIEEVDADXSGRLEFPEFVTL 258
+++AF FD + +G I + + + + + + LE +IEE D D G + EF+ +
Sbjct: 112 IKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAI 171
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 44.0 bits (99), Expect = 1e-05
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 5/145 (3%)
Frame = +1
Query: 52 SCPHNRIAVLRKAFFGFDHNRSGSIPCDFVADILRMMGXPFNXKILEELIEEVDADXSGR 231
S + I +RK F D N+SGSI + I + P + L VD D G
Sbjct: 17 SFSNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNP----LASRLFSVVDEDGGGD 72
Query: 232 LEFPEFVTLAAKFIVEEDAEAXXXELREAFRLYDKEGNGXXPTSSL-----REIXXXXXX 396
++F EF+ + F V + E +L+ AF++YD + +G L +
Sbjct: 73 VDFQEFINSLSVFSVHGNKE---EKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLRE 129
Query: 397 XXXXXXXXXXIQEIDTDGSGTVDFD 471
I E+D D G + F+
Sbjct: 130 DQLQQIVDKTIMEVDKDRDGKISFE 154
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 34.3 bits (75), Expect = 0.011
Identities = 24/99 (24%), Positives = 46/99 (46%)
Frame = +1
Query: 82 RKAFFGFDHNRSGSIPCDFVADILRMMGXPFNXKILEELIEEVDADXSGRLEFPEFVTLA 261
++AF FD + +G IP + D+LR G N + E I E+++ ++ +F+ +
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQ--NPTLAE--ITEIESTLPAEVDMEQFLQVL 64
Query: 262 AKFIVEEDAEAXXXELREAFRLYDKEGNGXXPTSSLREI 378
+ D E + F+++DK+ G LR +
Sbjct: 65 NR-PNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYV 102
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 31.1 bits (67), Expect = 0.10
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 103 DHNRSGSIPCDFVADILRMMGXPFNXKILEELIEEVDADXSGRLEFPEF 249
+ +S + V + +M+ + + LEE ++ DAD SG+L F EF
Sbjct: 307 EKEQSAQLDLGDVHRMCQMLHLNASMEFLEETFQKADADHSGKLSFEEF 355
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 190 EELIEEVDADXSGRLEFPEFVTLAAKFIVEEDAEAXXXELREAFRLYDKEGNG 348
E + DAD +G ++F EF+ + V E +L AF+LYD + NG
Sbjct: 66 EYVFNVFDADKNGYIDFKEFICALS---VTSRGE-LNDKLIWAFQLYDLDNNG 114
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 25.8 bits (54), Expect = 3.8
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 304 ELREAFRLYDKEGNG 348
EL+EAF L DK+G+G
Sbjct: 49 ELKEAFALLDKDGDG 63
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 187 LEELIEEVDADXSGRLEFPEFV 252
+ E I EV+ D SGR+E +FV
Sbjct: 56 VREAIREVNVDSSGRVEPEDFV 77
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 24.6 bits (51), Expect = 8.9
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -2
Query: 158 ILRISATKSQGILPERLWSXPKKALRRTAILLWGQLIGPVFGVPEPWLMSL 6
+L AT + + ER+ + A R + ++ LI P PE W SL
Sbjct: 500 VLEEDATDRERRIQERIAEKERLAKARRSQVIQRDLIRPSVTQPEKWKRSL 550
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,441,172
Number of Sequences: 5004
Number of extensions: 20910
Number of successful extensions: 80
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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