Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30372
         (460 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Re...    73   4e-12
UniRef50_Q9XUN9 Cluster: Troponin I 3; n=6; Caenorhabditis|Rep: ...    37   0.18 
UniRef50_UPI0000E48440 Cluster: PREDICTED: similar to troponin I...    36   0.42 
UniRef50_Q6AHQ1 Cluster: Troponin t protein 3, isoform b; n=9; R...    33   2.2  
UniRef50_P45379 Cluster: Troponin T, cardiac muscle; n=294; Eute...    33   3.9  
UniRef50_A4MI06 Cluster: Putative uncharacterized protein; n=1; ...    32   5.2  

>UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Rep:
           Troponin I - Drosophila melanogaster (Fruit fly)
          Length = 269

 Score = 72.5 bits (170), Expect = 4e-12
 Identities = 37/102 (36%), Positives = 50/102 (49%)
 Frame = +1

Query: 109 IDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 288
           I+RKRAEVRKRMEEAS       GFMTP                                
Sbjct: 75  IERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRI 134

Query: 289 XXXXCGKPKNIDDANEDTIKRVCKDYHERIARLEXEKFDLEY 414
               CG P+N+ DA+E  ++ +C++Y+ER+   E +K+DLEY
Sbjct: 135 IEERCGSPRNLSDASEGELQEICEEYYERMYICEGQKWDLEY 176


>UniRef50_Q9XUN9 Cluster: Troponin I 3; n=6; Caenorhabditis|Rep:
           Troponin I 3 - Caenorhabditis elegans
          Length = 260

 Score = 37.1 bits (82), Expect = 0.18
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
 Frame = +1

Query: 118 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 297
           K+AEVRKRMEEA+       GF+TP                                   
Sbjct: 31  KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90

Query: 298 XCGKPKNIDDANED-TIKRVCKDYHERIARLEXEKFDLEY 414
                 ++D  N+   + ++ +D   R+  LE EKFD+ +
Sbjct: 91  RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINF 130


>UniRef50_UPI0000E48440 Cluster: PREDICTED: similar to troponin I,
           partial; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to troponin I, partial -
           Strongylocentrotus purpuratus
          Length = 312

 Score = 35.9 bits (79), Expect = 0.42
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 307 KPKNIDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KE 429
           KP +ID  + D ++ +C++  E++   E  KFDLE I  K+
Sbjct: 230 KPLSIDSLSRDRLRALCEELTEQLTDAEGNKFDLEVIIRKQ 270


>UniRef50_Q6AHQ1 Cluster: Troponin t protein 3, isoform b; n=9;
            Rhabditida|Rep: Troponin t protein 3, isoform b -
            Caenorhabditis elegans
          Length = 1178

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 316  NIDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
            N  +  +  +K   K+ H+RI +LE EK+DLE    ++ Y
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEY 1082


>UniRef50_P45379 Cluster: Troponin T, cardiac muscle; n=294;
           Euteleostomi|Rep: Troponin T, cardiac muscle - Homo
           sapiens (Human)
          Length = 298

 Score = 32.7 bits (71), Expect = 3.9
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
           ID  NED ++   K+  + I  LE EKFDL+    +++Y
Sbjct: 231 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKY 269


>UniRef50_A4MI06 Cluster: Putative uncharacterized protein; n=1;
           Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
           protein - Geobacter bemidjiensis Bem
          Length = 404

 Score = 32.3 bits (70), Expect = 5.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 304 GKPKNIDDANEDTIKRVCKDYHERIARL 387
           G+P  +D+  +  +KRVC+DY E + R+
Sbjct: 158 GRPYALDEQRDLVLKRVCRDYEEAVNRI 185


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,983,524
Number of Sequences: 1657284
Number of extensions: 3546633
Number of successful extensions: 8096
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8094
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)