Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30372
(460 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79857-1|CAA56237.1| 255|Homo sapiens troponin T protein. 33 0.62
X74819-1|CAA52818.1| 288|Homo sapiens cardiac troponin T protein. 33 0.62
S64668-1|AAB27731.1| 288|Homo sapiens troponin T protein. 33 0.62
L40162-1|AAA67422.1| 288|Homo sapiens troponin T cardiac isofor... 33 0.62
EF179183-1|ABN05286.1| 295|Homo sapiens troponin T type 2 (card... 33 0.62
BC002653-1|AAH02653.1| 285|Homo sapiens troponin T type 2 (card... 33 0.62
AY277394-1|AAP96757.1| 226|Homo sapiens troponin T cardiac isof... 33 0.62
AY044273-2|AAK92232.1| 274|Homo sapiens truncated cardiac tropo... 33 0.62
AY044273-1|AAK92231.1| 288|Homo sapiens cardiac troponin T prot... 33 0.62
AK125236-1|BAC86093.1| 232|Homo sapiens protein ( Homo sapiens ... 33 0.62
AF004422-1|AAC39590.1| 288|Homo sapiens troponin T protein. 33 0.62
X79861-1|CAA56240.1| 250|Homo sapiens cardiac troponin T protein. 32 1.1
M21984-1|AAA36777.1| 258|Homo sapiens troponin T protein. 31 1.9
DQ778624-1|ABG77458.1| 250|Homo sapiens troponin T type 3 protein. 31 1.9
CR541927-1|CAG46725.1| 256|Homo sapiens TNNT3 protein. 31 1.9
BX640689-1|CAE45814.1| 256|Homo sapiens hypothetical protein pr... 31 1.9
BT019997-1|AAV38800.1| 256|Homo sapiens troponin T3, skeletal, ... 31 1.9
BC117327-1|AAI17328.1| 250|Homo sapiens troponin T type 3 (skel... 31 1.9
BC050446-1|AAH50446.1| 272|Homo sapiens TNNT3 protein protein. 31 1.9
AF026276-1|AAF21629.1| 258|Homo sapiens fast skeletal troponin ... 31 1.9
>X79857-1|CAA56237.1| 255|Homo sapiens troponin T protein.
Length = 255
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 188 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKY 226
>X74819-1|CAA52818.1| 288|Homo sapiens cardiac troponin T protein.
Length = 288
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 221 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKY 259
>S64668-1|AAB27731.1| 288|Homo sapiens troponin T protein.
Length = 288
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 221 IDHLNEDQLREKAKELWQTIYNLEAEKFDLQEKFKQQKY 259
>L40162-1|AAA67422.1| 288|Homo sapiens troponin T cardiac isoform
protein.
Length = 288
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 221 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKY 259
>EF179183-1|ABN05286.1| 295|Homo sapiens troponin T type 2
(cardiac) protein.
Length = 295
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 228 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKY 266
>BC002653-1|AAH02653.1| 285|Homo sapiens troponin T type 2
(cardiac) protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 218 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKY 256
>AY277394-1|AAP96757.1| 226|Homo sapiens troponin T cardiac isoform
protein.
Length = 226
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 159 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKY 197
>AY044273-2|AAK92232.1| 274|Homo sapiens truncated cardiac troponin
T protein.
Length = 274
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 221 IDHLNEDQLREKAKELWQTIYNLEAEKFDLQEKFKQQKY 259
>AY044273-1|AAK92231.1| 288|Homo sapiens cardiac troponin T
protein.
Length = 288
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 221 IDHLNEDQLREKAKELWQTIYNLEAEKFDLQEKFKQQKY 259
>AK125236-1|BAC86093.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ43246 fis, clone HEART1000139, highly similar
to TROPONIN T, CARDIAC MUSCLE ISOFORMS. ).
Length = 232
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 165 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKY 203
>AF004422-1|AAC39590.1| 288|Homo sapiens troponin T protein.
Length = 288
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
ID NED ++ K+ + I LE EKFDL+ +++Y
Sbjct: 221 IDHLNEDQLREKAKELWQTIYNLEAEKFDLQEKFKQQKY 259
>X79861-1|CAA56240.1| 250|Homo sapiens cardiac troponin T protein.
Length = 250
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 319 IDDANEDTIKRVCKDYHERIARLEXEKFDLE 411
ID NED ++ K+ + I LE EKFDL+
Sbjct: 215 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQ 245
>M21984-1|AAA36777.1| 258|Homo sapiens troponin T protein.
Length = 258
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 307 KPKNIDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
KP NID ED ++ K+ E + +LE +KF+ +++Y
Sbjct: 184 KPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKY 226
>DQ778624-1|ABG77458.1| 250|Homo sapiens troponin T type 3 protein.
Length = 250
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 307 KPKNIDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
KP NID ED ++ K+ E + +LE +KF+ +++Y
Sbjct: 176 KPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKY 218
>CR541927-1|CAG46725.1| 256|Homo sapiens TNNT3 protein.
Length = 256
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 307 KPKNIDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
KP NID ED ++ K+ E + +LE +KF+ +++Y
Sbjct: 182 KPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKY 224
>BX640689-1|CAE45814.1| 256|Homo sapiens hypothetical protein
protein.
Length = 256
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 307 KPKNIDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
KP NID ED ++ K+ E + +LE +KF+ +++Y
Sbjct: 182 KPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKY 224
>BT019997-1|AAV38800.1| 256|Homo sapiens troponin T3, skeletal,
fast protein.
Length = 256
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 307 KPKNIDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
KP NID ED ++ K+ E + +LE +KF+ +++Y
Sbjct: 182 KPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKY 224
>BC117327-1|AAI17328.1| 250|Homo sapiens troponin T type 3
(skeletal, fast) protein.
Length = 250
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 307 KPKNIDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
KP NID ED ++ K+ E + +LE +KF+ +++Y
Sbjct: 176 KPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKY 218
>BC050446-1|AAH50446.1| 272|Homo sapiens TNNT3 protein protein.
Length = 272
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 307 KPKNIDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
KP NID ED ++ K+ E + +LE +KF+ +++Y
Sbjct: 198 KPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKY 240
>AF026276-1|AAF21629.1| 258|Homo sapiens fast skeletal troponin T
protein.
Length = 258
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 307 KPKNIDDANEDTIKRVCKDYHERIARLEXEKFDLEYIX*KERY 435
KP NID ED ++ K+ E + +LE +KF+ +++Y
Sbjct: 184 KPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKY 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,763,799
Number of Sequences: 237096
Number of extensions: 544949
Number of successful extensions: 889
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -