Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30368
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   196   3e-52
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   2.6  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  196 bits (479), Expect = 3e-52
 Identities = 91/130 (70%), Positives = 109/130 (83%)
 Frame = +2

Query: 2   FQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILT 181
           FQKQ  + LNRK   ++K +R H ++GLGFKTP+EAI GTYIDKKCPFTG++SIRGRILT
Sbjct: 10  FQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRILT 69

Query: 182 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 361
           GVV+K  +   + IRRDYL ++ KY+ FEKR+RNM +HLSPCFRDVE GDIVT+GECRPL
Sbjct: 70  GVVRKCIV--LLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFRDVEAGDIVTLGECRPL 127

Query: 362 SKTVRFNVLK 391
           SKTVRFNVLK
Sbjct: 128 SKTVRFNVLK 137


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 181  GEDAAADRNVTSEGTLLVNVGT 116
            GED   D+   S+GTLL  +GT
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGT 1288


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,354
Number of Sequences: 2352
Number of extensions: 9896
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)