Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30367
(516 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030422-1|ABO52842.1| 409|Drosophila melanogaster IP17664p pro... 30 1.6
AY060735-1|AAL28283.1| 316|Drosophila melanogaster GH18603p pro... 30 1.6
AF228283-1|AAK00731.1| 316|Drosophila melanogaster ubiquitin fu... 30 1.6
AF228282-1|AAK00730.1| 316|Drosophila melanogaster ubiquitin fu... 30 1.6
AE014296-1911|AAF50090.1| 316|Drosophila melanogaster CG6233-PA... 30 1.6
AY069429-1|AAL39574.1| 479|Drosophila melanogaster LD13887p pro... 29 2.8
AE014296-1669|AAF50260.2| 783|Drosophila melanogaster CG32043-P... 29 2.8
AE014296-1668|AAF50261.2| 783|Drosophila melanogaster CG32043-P... 29 2.8
AE014296-964|AAN12098.1| 682|Drosophila melanogaster CG10625-PC... 29 4.9
AE014296-963|AAF50773.2| 682|Drosophila melanogaster CG10625-PB... 29 4.9
AY069580-1|AAL39725.1| 406|Drosophila melanogaster LD31675p pro... 28 6.5
AE014134-2099|AAF53122.1| 406|Drosophila melanogaster CG14939-P... 28 6.5
BT016018-1|AAV36903.1| 463|Drosophila melanogaster RE19971p pro... 28 8.6
AY069121-1|AAL39266.1| 514|Drosophila melanogaster GH13192p pro... 28 8.6
AY061535-1|AAL29083.1| 388|Drosophila melanogaster LP01629p pro... 28 8.6
AE014297-4573|AAF57031.3| 476|Drosophila melanogaster CG9682-PA... 28 8.6
AE013599-155|AAF57277.1| 514|Drosophila melanogaster CG8345-PA ... 28 8.6
>BT030422-1|ABO52842.1| 409|Drosophila melanogaster IP17664p
protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 438 HLAGNVCGCDHLAGNVCGCDWHGNGRLHDGQGNNAGSL 325
H++G +C + G +GNG ++G GNN S+
Sbjct: 67 HISGGLCDNSNALNGGNGSSGNGNGNNNNGNGNNNNSM 104
>AY060735-1|AAL28283.1| 316|Drosophila melanogaster GH18603p
protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 400 SKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAP 507
S++ TP V KV+ YD+++G+IR+D ++ P
Sbjct: 248 SQLETP--VVKKVLARGVPDYDFQFGLIRFDRNIRP 281
>AF228283-1|AAK00731.1| 316|Drosophila melanogaster ubiquitin
fusion-degradation 1-like protein protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 400 SKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAP 507
S++ TP V KV+ YD+++G+IR+D ++ P
Sbjct: 248 SQLETP--VVKKVLARGVPDYDFQFGLIRFDRNIRP 281
>AF228282-1|AAK00730.1| 316|Drosophila melanogaster ubiquitin
fusion-degradation 1-like protein protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 400 SKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAP 507
S++ TP V KV+ YD+++G+IR+D ++ P
Sbjct: 248 SQLETP--VVKKVLARGVPDYDFQFGLIRFDRNIRP 281
>AE014296-1911|AAF50090.1| 316|Drosophila melanogaster CG6233-PA
protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 400 SKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAP 507
S++ TP V KV+ YD+++G+IR+D ++ P
Sbjct: 248 SQLETP--VVKKVLARGVPDYDFQFGLIRFDRNIRP 281
>AY069429-1|AAL39574.1| 479|Drosophila melanogaster LD13887p
protein.
Length = 479
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 3/19 (15%)
Frame = +2
Query: 383 HPHTLP---ARWSHPHTLP 430
HPHT P A+ SHPHTLP
Sbjct: 337 HPHTHPHPHAQHSHPHTLP 355
>AE014296-1669|AAF50260.2| 783|Drosophila melanogaster CG32043-PB,
isoform B protein.
Length = 783
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 3/19 (15%)
Frame = +2
Query: 383 HPHTLP---ARWSHPHTLP 430
HPHT P A+ SHPHTLP
Sbjct: 641 HPHTHPHPHAQHSHPHTLP 659
>AE014296-1668|AAF50261.2| 783|Drosophila melanogaster CG32043-PA,
isoform A protein.
Length = 783
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 3/19 (15%)
Frame = +2
Query: 383 HPHTLP---ARWSHPHTLP 430
HPHT P A+ SHPHTLP
Sbjct: 641 HPHTHPHPHAQHSHPHTLP 659
>AE014296-964|AAN12098.1| 682|Drosophila melanogaster CG10625-PC,
isoform C protein.
Length = 682
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 97 PFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAY 198
P+ G+Y + GRY+ D GRY D+SG Y
Sbjct: 462 PYTPDNGKYNGNGGRYNGIND--GRYYHDDSGKY 493
>AE014296-963|AAF50773.2| 682|Drosophila melanogaster CG10625-PB,
isoform B protein.
Length = 682
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 97 PFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAY 198
P+ G+Y + GRY+ D GRY D+SG Y
Sbjct: 462 PYTPDNGKYNGNGGRYNGIND--GRYYHDDSGKY 493
>AY069580-1|AAL39725.1| 406|Drosophila melanogaster LD31675p
protein.
Length = 406
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 336 HCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGG 440
H S + + +H AS H+ GH + QQGG
Sbjct: 38 HTSQHQLDGHHGSASAVHLHHHHHGHNQQQNQQGG 72
>AE014134-2099|AAF53122.1| 406|Drosophila melanogaster CG14939-PA
protein.
Length = 406
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 336 HCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGG 440
H S + + +H AS H+ GH + QQGG
Sbjct: 38 HTSQHQLDGHHGSASAVHLHHHHHGHNQQQNQQGG 72
>BT016018-1|AAV36903.1| 463|Drosophila melanogaster RE19971p
protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 438 HLAGNVCG-CDHLAGNVCGCDWHGNGRLHDGQGNNAGSLVS 319
H AGN G + AGNV G + G + GN AGS+ +
Sbjct: 344 HAAGNAAGDVANAAGNVAGNASNAAGDVASAAGNVAGSVAN 384
>AY069121-1|AAL39266.1| 514|Drosophila melanogaster GH13192p
protein.
Length = 514
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 85 STVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAY 198
STV+ V++ +Y DP +YDP R NS N AY
Sbjct: 405 STVA--VHRDPQYWPDPEKYDPERFNSSNRDNLNMDAY 440
>AY061535-1|AAL29083.1| 388|Drosophila melanogaster LP01629p
protein.
Length = 388
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 438 HLAGNVCG-CDHLAGNVCGCDWHGNGRLHDGQGNNAGSLVS 319
H AGN G + AGNV G + G + GN AGS+ +
Sbjct: 269 HAAGNAAGDVANAAGNVAGNASNAAGDVASAAGNVAGSVAN 309
>AE014297-4573|AAF57031.3| 476|Drosophila melanogaster CG9682-PA
protein.
Length = 476
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 438 HLAGNVCG-CDHLAGNVCGCDWHGNGRLHDGQGNNAGSLVS 319
H AGN G + AGNV G + G + GN AGS+ +
Sbjct: 357 HAAGNAAGDVANAAGNVAGNASNAAGDVASAAGNVAGSVAN 397
>AE013599-155|AAF57277.1| 514|Drosophila melanogaster CG8345-PA
protein.
Length = 514
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 85 STVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAY 198
STV+ V++ +Y DP +YDP R NS N AY
Sbjct: 405 STVA--VHRDPQYWPDPEKYDPERFNSSNRDNLNMDAY 440
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.315 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,328,929
Number of Sequences: 53049
Number of extensions: 353640
Number of successful extensions: 1117
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -