Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30363
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   1.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.6  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    22   2.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   2.8  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   4.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.5  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   8.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.6  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 156 PGPTESYLRHHPNPAMRAPP 215
           P  T  Y R+HP P    PP
Sbjct: 167 PVYTHHYARYHPYPNFGVPP 186


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 3   TSIPTSVTMSLNPNFFPNGYQDPKHPEEEVVSNWPY 110
           T  PTSV   L P+  P     P  P    +++ PY
Sbjct: 312 TPTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPY 347


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 6/17 (35%), Positives = 15/17 (88%)
 Frame = +3

Query: 285 EEAPKVLHKQFNSPINL 335
           ++APK+++ ++NS +N+
Sbjct: 13  QKAPKIVNSKYNSILNI 29


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 6/17 (35%), Positives = 15/17 (88%)
 Frame = +3

Query: 285 EEAPKVLHKQFNSPINL 335
           ++APK+++ ++NS +N+
Sbjct: 13  QKAPKIVNSKYNSILNI 29


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 248 KGGRVGAAASG 280
           KGG  GAAASG
Sbjct: 119 KGGGAGAAASG 129


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 51  PNGYQDPKHPEEEVVSNWP 107
           PN    P  PEEE  S  P
Sbjct: 39  PNSAASPAPPEEEAASPTP 57


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 221 VVRRCPHCWV 192
           VV   PHCWV
Sbjct: 485 VVEGNPHCWV 494


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 337 YRLIGELNCLCN 302
           Y ++  LNCLC+
Sbjct: 212 YHILAMLNCLCS 223


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 337 YRLIGELNCLCN 302
           Y ++  LNCLC+
Sbjct: 212 YHILAMLNCLCS 223


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 366 RQQTSPLPTNGHYGRPHVVKRQ 431
           R + SPL  NG+   PH+   Q
Sbjct: 94  RLEKSPLLANGYNHSPHLSHMQ 115


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 141 KVRREPGPTESYLRHHPNPAMRAPPNH 221
           +V++E   T   L    NPA   PP++
Sbjct: 7   QVKQEADSTSPLLTPPHNPAYSPPPSY 33


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 246 QKVAESVLQRVVGEEAPKVLHKQFNSP 326
           Q V +  L+  +  +   +LH+QFN P
Sbjct: 615 QNVKKINLKHALDLDRQGLLHRQFNLP 641


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +3

Query: 156 PGPTESYLRHHPNPAMRAPPNH 221
           PG    +  H+ +P  + PP H
Sbjct: 120 PGAALPFFCHNGDPLSQPPPAH 141


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +3

Query: 156 PGPTESYLRHHPNPAMRAPPNH 221
           PG    +  H+ +P  + PP H
Sbjct: 12  PGAALPFFCHNGDPLSQPPPAH 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,095
Number of Sequences: 336
Number of extensions: 2929
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)