Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30363
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 36 0.017
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 36 0.017
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 35 0.040
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 34 0.052
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 34 0.052
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 34 0.052
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.052
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 34 0.052
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 34 0.052
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 34 0.052
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 34 0.052
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.052
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 34 0.052
Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 34 0.069
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 33 0.12
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 31 0.49
AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical ... 29 1.5
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 3.4
U88311-4|AAB42344.1| 537|Caenorhabditis elegans Udp-glucuronosy... 28 3.4
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 28 4.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 4.6
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 28 4.6
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 28 4.6
Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical pr... 27 6.0
U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical ... 27 8.0
AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical ... 27 8.0
AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical ... 27 8.0
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 27 8.0
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.017
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 300 VLHKQFNSPINLYSEQNIANSIRQQTSPLP 389
V H Q+NSP+NLYS + A + QQT +P
Sbjct: 341 VHHLQYNSPMNLYSSEATAEQLYQQTGAVP 370
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.017
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 300 VLHKQFNSPINLYSEQNIANSIRQQTSPLP 389
V H Q+NSP+NLYS + A + QQT +P
Sbjct: 341 VHHLQYNSPMNLYSSEATAEQLYQQTGAVP 370
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 34.7 bits (76), Expect = 0.040
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 288 EAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E P+ +H Q+NSP+ LYS++ +QQ P +
Sbjct: 119 EMPQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPND 154
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 285 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 285 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 285 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 62 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 98
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 285 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 285 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 285 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 285 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 285 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 62 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 98
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 285 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 285 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical
protein C54G4.4 protein.
Length = 868
Score = 33.9 bits (74), Expect = 0.069
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = -3
Query: 433 TCLLTTCGRP*WPLVGRGEVCCLIEFAMF-------CSE-YRLIGELNCLCNTLGASSPT 278
TC L CGRP PL+ G V +E + F C + +RLIG + +C G P
Sbjct: 600 TCELVDCGRP--PLIANGRVD--VESSTFESAANYTCHQGFRLIGPESLMCGDRGEWQPA 655
Query: 277 TRCSTDSATFCFIRVS 230
T D AT IR S
Sbjct: 656 TPFCYDIATLQEIRGS 671
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 294 PKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 395
P+ +H Q+NSP+ LYS++ +QQ P +
Sbjct: 2 PQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPND 35
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical protein
C05C9.3 protein.
Length = 1225
Score = 31.1 bits (67), Expect = 0.49
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 168 ESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAPKVLHKQFNSP---INLY 338
E ++ +H N R H+ + + KQKV E Q++ + K +Q ++P I +
Sbjct: 1002 EKFMMYHQNLQQRLQYEHEQQMQIQKQKVQEQHHQQIRHHQMLKQEQRQNHNPMHQIEHF 1061
Query: 339 SEQNIANSIR 368
+ + N +R
Sbjct: 1062 QQHQLVNKVR 1071
>AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical
protein Y47D3A.1 protein.
Length = 454
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 278 HSLQHRLCHLLFHKGITVVVVRRCPHCWVGV 186
HS++ ++FHK ++RRCP+C V +
Sbjct: 61 HSIRIEHQTVIFHKPTRCDIIRRCPNCTVNL 91
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 315 FNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHV--VKRQVF 437
F+S N + + +S+ Q PLP HY RPH +K VF
Sbjct: 6 FSSRRNCFPCAPLYSSLLAQCVPLPLQHHYHRPHYESLKSSVF 48
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 119 SSRAPGS*GPKGAWPHRELPASSPQPSNEG 208
S+ A GS GP G+ PH + P PSN G
Sbjct: 45 STSAGGSGGPSGSTPHPQ-GTPQPAPSNNG 73
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 119 SSRAPGS*GPKGAWPHRELPASSPQPSNEG 208
S+ A GS GP G+ PH + P PSN G
Sbjct: 45 STSAGGSGGPSGSTPHPQ-GTPQPAPSNNG 73
>U88311-4|AAB42344.1| 537|Caenorhabditis elegans
Udp-glucuronosyltransferase protein28 protein.
Length = 537
Score = 28.3 bits (60), Expect = 3.4
Identities = 27/101 (26%), Positives = 46/101 (45%)
Frame = -2
Query: 464 DCCIVAFLVKDLPLDNVRPSVMAVSWQRRSLLPDRVCNVLFRV*IDWRVELLVQHLRCLF 285
D CI L KDL + V P +S+++ S P+ LF W+ E+ + R +F
Sbjct: 62 DECIGVKLTKDLVI--VEPDEEMMSFKKGST-PNGEIMELF-----WKSEMDSSNSRDMF 113
Query: 284 ANHSLQHRLCHLLFHKGITVVVVRRCPHCWVGVMTQVTLCG 162
+ + +L FHK + + + V ++ VT+CG
Sbjct: 114 SFFNSDMKLACRNFHKRRDIFEQMKSRNFDVAILEPVTICG 154
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 330 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 431
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 330 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 431
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 330 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 431
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +3
Query: 132 PGAKVRREPGPTESYLRH---HPNPAMRAPPNHDYRDTLMKQKVAESV 266
PG RR PGP R P P R PP H M + +++
Sbjct: 250 PGPPTRRPPGPPGPPTRRPPGPPGPPTRRPPGHQGHHITMIMDIMDTM 297
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 330 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 431
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 330 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 431
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical
protein K04B12.3 protein.
Length = 891
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 267 LQRVVGEEAPKVLHKQFNSPINLYSEQNI-ANSIRQQTSPLPTNGHYGRPHVVKRQV 434
LQR + E+ K L QF+ + LY + A+S+ Q +P H P +VKR +
Sbjct: 206 LQRELYEKLEKNLDNQFSDILKLYDLIDCGASSLCQLNETIPV-VHLLNPKIVKRDI 261
>U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical
protein C18F10.2 protein.
Length = 711
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 295 LRCCTSNSTLQSIYTRNRTLQTLSGSKLRLCQLTAITDGRTLS 423
L C + S +++ +T+ +++ SK +LC +A+T LS
Sbjct: 205 LLSCFNISMMKTATVSGQTIGSIACSKFKLCSFSAVTSNPCLS 247
>AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical
protein C09D4.4c protein.
Length = 916
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +3
Query: 243 KQKVAESVLQRVVGEEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHV 419
K ++AE L R E A K+L +Q N +LYSEQ+ ++ +P+ ++ G P V
Sbjct: 565 KDRMAEFELLRE-REAAKKMLRQQTNYEGHLYSEQSGRSTAGPVCTPIKSSLVIGDPVV 622
>AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical
protein C09D4.4b protein.
Length = 915
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +3
Query: 243 KQKVAESVLQRVVGEEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHV 419
K ++AE L R E A K+L +Q N +LYSEQ+ ++ +P+ ++ G P V
Sbjct: 564 KDRMAEFELLRE-REAAKKMLRQQTNYEGHLYSEQSGRSTAGPVCTPIKSSLVIGDPVV 621
>AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical
protein C09D4.4a protein.
Length = 913
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +3
Query: 243 KQKVAESVLQRVVGEEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHV 419
K ++AE L R E A K+L +Q N +LYSEQ+ ++ +P+ ++ G P V
Sbjct: 562 KDRMAEFELLRE-REAAKKMLRQQTNYEGHLYSEQSGRSTAGPVCTPIKSSLVIGDPVV 619
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 306 HKQFNSPINLYSEQ---NIANSIRQQTSPLPTNGHYGRP 413
H+Q P+N+Y++Q N SI TS P ++G P
Sbjct: 489 HQQIPPPVNIYAQQPPPNPLGSILGNTSLTPQTLNFGLP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,559,381
Number of Sequences: 27780
Number of extensions: 286619
Number of successful extensions: 1103
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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