Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30359
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 10  HTTSMNKIYLKNVDDLILHY*QQRSYHEERERTMDAMVKEIL 135
           HT + +   +KN D +   Y     +HE +E  M+  +K IL
Sbjct: 545 HTDASSAKAVKNSDHITRIYACATMWHENKEEMME-FLKSIL 585


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 10  HTTSMNKIYLKNVDDLILHY*QQRSYHEERERTMDAMVKEIL 135
           HT + +   +KN D +   Y     +HE +E  M+  +K IL
Sbjct: 545 HTDASSAKAVKNSDHITRIYACATMWHENKEEMME-FLKSIL 585


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 10  HTTSMNKIYLKNVDDLILHY*QQRSYHEERERTMDAMVKEIL 135
           HT + +   +KN D +   Y     +HE +E  M+  +K IL
Sbjct: 545 HTDASSAKAVKNSDHITRIYACATMWHENKEEMME-FLKSIL 585


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 10  HTTSMNKIYLKNVDDLILHY*QQRSYHEERERTMDAMVKEIL 135
           HT + +   +KN D +   Y     +HE +E  M+  +K IL
Sbjct: 545 HTDASSAKAVKNSDHITRIYACATMWHENKEEMME-FLKSIL 585


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 174 SAFIVSXMPSFFVKNFFD 121
           S F+   +P F   NFFD
Sbjct: 310 SNFVSQHLPKFSAANFFD 327


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +2

Query: 62   FIISNNEATMRKGKEPWTQWSKKFFTK 142
            F + N +  + K  + W  +  KF+ K
Sbjct: 1859 FAVLNGDQLIIKPHDTWADFDNKFYEK 1885


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 396 HLFKFYRTWVQIFHLDV 346
           H F  YR WVQ  H ++
Sbjct: 488 HTFYDYRPWVQHGHQEL 504


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +1

Query: 58  ILHY*QQRSYHEERERTMDAMVKEILHKK 144
           ILH  +   +H + E  + +   ++LH+K
Sbjct: 323 ILHELRNNYFHMDLENNVQSYSLQLLHQK 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,714
Number of Sequences: 336
Number of extensions: 1742
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)