Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30358
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   1.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   2.8  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   6.5  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 45  GFCVTYIQ*EKLKLMHFERTCI 110
           G C +YIQ    K+   ER+C+
Sbjct: 67  GRCASYIQVSGSKIWQMERSCM 88


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 494 PEHCAHIYSIGIQHLEQYYLA*TVVPLTAEQVSPNS 387
           P H  + Y   +QH  Q  +    V L +EQV P+S
Sbjct: 486 PWHTFYDYRPWVQHGHQELVLGGEVCLWSEQVGPDS 521


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 227 SDLYEPDYLIS 259
           S++Y PDYL+S
Sbjct: 92  SEMYGPDYLMS 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,794
Number of Sequences: 336
Number of extensions: 2111
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)