BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV30358 (516 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_05_0564 - 25655095-25655106,25656089-25656541,25656886-256569... 31 0.73 04_02_0007 + 8464923-8465155,8466037-8466591,8466645-8467662,846... 30 1.3 07_01_0626 - 4681826-4682707 29 2.2 12_01_0203 + 1520079-1520302,1522346-1522405,1522794-1523016,152... 28 5.1 10_08_0842 - 20954712-20957738 28 5.1 07_03_1726 - 29062654-29064414 27 6.8 09_02_0111 - 4386913-4387295,4388000-4388078,4389553-4390659 27 8.9 03_05_1149 + 30753463-30754695,30754834-30755017,30755321-307565... 27 8.9 >03_05_0564 - 25655095-25655106,25656089-25656541,25656886-25656962, 25657058-25657149,25657447-25657553,25657662-25657747, 25657861-25657977,25658205-25658288,25658400-25658479, 25658958-25659132,25659455-25659521,25660175-25660236, 25660369-25660450,25660890-25661312,25661514-25661610, 25662055-25662095,25662673-25662837 Length = 739 Score = 30.7 bits (66), Expect = 0.73 Identities = 16/61 (26%), Positives = 33/61 (54%) Frame = +2 Query: 83 IDAL*ENMYSNMLRNNLKNLIKSCRSVQLKIIDSVGTNHIITNQRRFKSDLYEPDYLISL 262 I L +N + M R+N + + + + +QL +D + + + +RR K+ +EP YL + Sbjct: 231 IKQLSDNTFQLMFRSNWNDFLHTIKGIQLPSVDHLVSTIVQWFERRSKA--FEPTYLYGV 288 Query: 263 Q 265 + Sbjct: 289 E 289 >04_02_0007 + 8464923-8465155,8466037-8466591,8466645-8467662, 8467768-8468485,8468651-8468937 Length = 936 Score = 29.9 bits (64), Expect = 1.3 Identities = 24/88 (27%), Positives = 42/88 (47%) Frame = -2 Query: 491 EHCAHIYSIGIQHLEQYYLA*TVVPLTAEQVSPNSPLLVIPSLQHIYGSDFGTLPI*HNH 312 E+C + + +Q + L ++P + +S N LV+ Q I G T+ H Sbjct: 353 ENCTELIELSLQ----WNLLDGILPSSVSNISTNLQALVLRGNQ-ISGRIPSTIG--KLH 405 Query: 311 NL*VASSNSHRLAHQVVS*SGNQVHIGH 228 NL + + ++L+ Q+ S GN H+GH Sbjct: 406 NLYILDLSINKLSGQIPSTIGNISHLGH 433 >07_01_0626 - 4681826-4682707 Length = 293 Score = 29.1 bits (62), Expect = 2.2 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = +2 Query: 131 LKNLIKSCRSVQLKIIDSVGTNHIIT 208 L N++ +CR+++L+ I SVG ++T Sbjct: 117 LNNMLVTCRNIKLESITSVGITRVVT 142 >12_01_0203 + 1520079-1520302,1522346-1522405,1522794-1523016, 1523038-1523434,1523522-1523781,1523866-1524011, 1524044-1524317,1524501-1525547 Length = 876 Score = 27.9 bits (59), Expect = 5.1 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -2 Query: 455 HLEQYYLA*TVVPLTAEQVSPNSPLLVIPSLQHIYGSDFGTLP 327 +LE Y+ T+ PL + L +PS++H G+ FG P Sbjct: 726 NLESYHFLSTIPPLGHLPLLKLLTLRKLPSVKHANGTSFGGFP 768 >10_08_0842 - 20954712-20957738 Length = 1008 Score = 27.9 bits (59), Expect = 5.1 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%) Frame = +2 Query: 65 TIRKIKIDAL*ENMYSNMLRNNLKNLIKSCRSVQLKIIDSVGTNHIITNQRRFKSDLYEP 244 TI I D E + ++ ++ + +++K+ID+ G + ++Q + L Sbjct: 399 TINSIFDDVRLETNAFDTSTRKVQEVVGAVEGIKVKVIDTPGLSCSSSDQHHNQKILNSV 458 Query: 245 DYLISLQPDEPV--YDCLNLQLKGY-DYAILE 331 LIS P + V +D L++Q + Y D +L+ Sbjct: 459 KRLISRNPPDIVLYFDRLDMQTRDYGDVPLLQ 490 >07_03_1726 - 29062654-29064414 Length = 586 Score = 27.5 bits (58), Expect = 6.8 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +2 Query: 239 EPDYLISLQPDEPVYDCLNLQLKGYDYAI--LEACQSQIHRYA 361 EP+ ++S VY C N+Q +YA+ L+ + H+YA Sbjct: 421 EPELMLSSDSHARVYTCGNVQCPHSNYALGFLDRNERNAHQYA 463 >09_02_0111 - 4386913-4387295,4388000-4388078,4389553-4390659 Length = 522 Score = 27.1 bits (57), Expect = 8.9 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -2 Query: 419 PLTAEQVSPNSPLLVIPSLQH--IYGSDFGTLPI*HN 315 PLTA SP L +P L H +Y S G L + H+ Sbjct: 65 PLTASSSSPRLSLDFVPDLSHFSLYDSHHGLLLLRHH 101 >03_05_1149 + 30753463-30754695,30754834-30755017,30755321-30756549, 30756702-30756816,30757126-30758084 Length = 1239 Score = 27.1 bits (57), Expect = 8.9 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 1/78 (1%) Frame = +2 Query: 278 VYDCLNLQLKGYDYAILEACQSQIHRYAEVMGLQVEDC-WATPAQQLKVQRFKPGSTALD 454 V+ C + + + +L Y+ V+ L W T QL PGS+ Sbjct: 56 VHACTDHNGVSFLHKLLHRLLEHKEMYSNVVNLLFHGIEWQTEGVQLLCSFLGPGSSVKQ 115 Query: 455 AEYQLNIYERNVQVVDVP 508 E+Q N++ VP Sbjct: 116 VEFQKNVFGTKSSAALVP 133 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,857,097 Number of Sequences: 37544 Number of extensions: 188322 Number of successful extensions: 434 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 432 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 434 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1118831240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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