Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30358
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009764-1|AAH09764.1|  212|Homo sapiens mitochondrial ribosomal...    42   0.001
AF151876-1|AAD34113.1|  212|Homo sapiens CGI-118 protein protein.      42   0.001

>BC009764-1|AAH09764.1|  212|Homo sapiens mitochondrial ribosomal
           protein L48 protein.
          Length = 212

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 19/77 (24%), Positives = 39/77 (50%)
 Frame = +2

Query: 281 YDCLNLQLKGYDYAILEACQSQIHRYAEVMGLQVEDCWATPAQQLKVQRFKPGSTALDAE 460
           Y  LN+ L  YD  + E+    +H     + ++VE+ +A P + ++V + +   + +  +
Sbjct: 88  YGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLD 147

Query: 461 YQLNIYERNVQVVDVPA 511
             L  +ER VQ+  + A
Sbjct: 148 SVLTTHERVVQISGLSA 164


>AF151876-1|AAD34113.1|  212|Homo sapiens CGI-118 protein protein.
          Length = 212

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 19/77 (24%), Positives = 39/77 (50%)
 Frame = +2

Query: 281 YDCLNLQLKGYDYAILEACQSQIHRYAEVMGLQVEDCWATPAQQLKVQRFKPGSTALDAE 460
           Y  LN+ L  YD  + E+    +H     + ++VE+ +A P + ++V + +   + +  +
Sbjct: 88  YGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLD 147

Query: 461 YQLNIYERNVQVVDVPA 511
             L  +ER VQ+  + A
Sbjct: 148 SVLTTHERVVQISGLSA 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,632,880
Number of Sequences: 237096
Number of extensions: 1069681
Number of successful extensions: 1881
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1881
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)