Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30357
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          25   0.46 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   1.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   7.5  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   10.0 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   10.0 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   10.0 
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   10.0 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   10.0 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   10.0 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   10.0 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   10.0 

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 416 ANRSRTVSAMTLTLLSFWCPYAASRIASTIF 508
           A  ++ V+ M    L  W PYAA  IA+  F
Sbjct: 107 AKITKMVALMITAFLLAWSPYAALAIAAQYF 137


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 176 GSGSAHPWSSVSWTESLTDAA 238
           G  S+H   S SWT+   DAA
Sbjct: 399 GQSSSHHHGSKSWTQEDMDAA 419


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 427 GSVRRMNMSRWCRVVLRTWRAAPQSEP 347
           G VR + + +  R+VL  ++   +SEP
Sbjct: 311 GIVRSLVLDKLARIVLLNFQEERRSEP 337


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 109 KSVQPSRCRWTCRADASCRSHSRIPWLM 26
           KS  P+        DA CR+H   P +M
Sbjct: 42  KSSGPNELGRFKHTDACCRTHDMCPDVM 69


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 109 KSVQPSRCRWTCRADASCRSHSRIPWLM 26
           KS  P+        DA CR+H   P +M
Sbjct: 47  KSSGPNELGRFKHTDACCRTHDMCPDVM 74


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 49  DFYTTRRPYRSTYSVTAEL 105
           +F+TT   +RST  V + L
Sbjct: 342 NFFTTSNGFRSTLPVVSNL 360


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 49  DFYTTRRPYRSTYSVTAEL 105
           +F+TT   +RST  V + L
Sbjct: 311 NFFTTSNGFRSTLPVVSNL 329


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 49  DFYTTRRPYRSTYSVTAEL 105
           +F+TT   +RST  V + L
Sbjct: 362 NFFTTSNGFRSTLPVVSNL 380


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 49  DFYTTRRPYRSTYSVTAEL 105
           +F+TT   +RST  V + L
Sbjct: 311 NFFTTSNGFRSTLPVVSNL 329


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = +2

Query: 170 W*GSGSAHPWSSVSWTES 223
           W      H W ++ WT+S
Sbjct: 85  WTSVMELHSWMTLMWTDS 102


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 109 KSVQPSRCRWTCRADASCRSHSRIPWLM 26
           KS  P+        DA CR+H   P +M
Sbjct: 47  KSSGPNELGRFKHTDACCRTHDMCPDVM 74


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,824
Number of Sequences: 438
Number of extensions: 2844
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)