Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30356
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0E213 Cluster: Chromosome undetermined scaffold_74, wh...    34   1.7  
UniRef50_Q7US18 Cluster: Putative uncharacterized protein; n=2; ...    33   5.1  
UniRef50_Q4Q233 Cluster: Putative uncharacterized protein; n=3; ...    32   6.8  
UniRef50_A7Q1Q5 Cluster: Chromosome chr7 scaffold_44, whole geno...    32   8.9  

>UniRef50_A0E213 Cluster: Chromosome undetermined scaffold_74, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_74,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 385

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 28/100 (28%), Positives = 44/100 (44%)
 Frame = -3

Query: 421 ILSQRFGISSSRYDAVTRCYPWAPVTAQRSAATSSIRVHQYQKFKVISIVQILYLTHVRL 242
           +L + FG S  R    T    W  +   ++ AT + RVHQ Q    +  V +L    +  
Sbjct: 197 LLQKHFGASIKRASKFTYRTSWGKMF--KALATITSRVHQLQDSAQVENVILLIDQLLEQ 254

Query: 241 QRSSFS*LKFTNEKRFLS*KGTL*TLVLHLNNILNEVVSA 122
              S    KF+ EKR  + + T   LV+ +N   + + SA
Sbjct: 255 VHDSMDLEKFSEEKRIQAYEKTRNLLVISINTTESTLASA 294


>UniRef50_Q7US18 Cluster: Putative uncharacterized protein; n=2;
           Pirellula sp.|Rep: Putative uncharacterized protein -
           Rhodopirellula baltica
          Length = 527

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 435 LVRAIFFLNDSAFRAHVTMQSRVATHGHR*PLNDQLQPRLYA 310
           LVR + + N+      +T  S+   HGHR P +D +QP L A
Sbjct: 95  LVRFLLYANEWDIEGIITSSSQYHAHGHRWPGDDWVQPFLAA 136


>UniRef50_Q4Q233 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 819

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 505 CELLCVCISALIRYRTSFEPNN-AFSTRYILSQRFGISSSRYDAVTRCYP 359
           C  +CVC+ AL+R R  F  +   FS  ++ + R G+  S Y     C+P
Sbjct: 198 CVCVCVCVCALVRERDGFSVSGFLFSIYFLCAPRNGVHPS-YRFRFLCFP 246


>UniRef50_A7Q1Q5 Cluster: Chromosome chr7 scaffold_44, whole genome
           shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
           chr7 scaffold_44, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 439

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -3

Query: 454 FEPNNAFSTRYILSQRFGISSSRYDAV-TRCYPWAPVTAQRSAATSSIRVHQYQKFKVIS 278
           F+PN+ F  R  L Q+      +Y A+   C   APV       T+ I V QY+ F  ++
Sbjct: 92  FDPNSTFDERNELRQQ---RRQQYGALKAECQKMAPVIGSGKFITTPIMVDQYKIFPPMT 148

Query: 277 IVQILYLTHVRL 242
           I +++   H ++
Sbjct: 149 IHRMITEPHKKV 160


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,696,447
Number of Sequences: 1657284
Number of extensions: 7065957
Number of successful extensions: 13342
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13339
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)