Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30356
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0315 - 20139544-20140545,20140674-20141547,20142313-20142320     28   3.9  
11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475           27   6.8  
01_06_0491 - 29763738-29764044,29764266-29764474,29764565-297646...    27   6.8  
03_02_0500 - 8915300-8915349,8915567-8915717,8916308-8916516,891...    27   8.9  

>05_04_0315 - 20139544-20140545,20140674-20141547,20142313-20142320
          Length = 627

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 9/16 (56%), Positives = 15/16 (93%)
 Frame = +1

Query: 376 LHRNVSSKCRIVEKEY 423
           LHRN+SSKC +++++Y
Sbjct: 439 LHRNISSKCILLDEDY 454


>11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475
          Length = 634

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +1

Query: 376 LHRNVSSKCRIVEKEY 423
           LHRN+SSKC +++ +Y
Sbjct: 446 LHRNISSKCILLDDDY 461


>01_06_0491 -
           29763738-29764044,29764266-29764474,29764565-29764654,
           29764819-29764905,29765598-29765733,29766036-29766186,
           29766334-29766502
          Length = 382

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -3

Query: 499 LLCVCISALIRYRTSFEPNNAFSTRYIL--SQRFGISSSRYDAVTRCYPWAPVTAQRSAA 326
           L  VC+ ++ +    ++ +  F  R+++  S RF     R D V    PW  +TA  +  
Sbjct: 102 LSIVCVWSICQVDVCYDVSTGFFVRWMVGKSVRFRFGDRRIDWVYLFGPWVVITAASTMK 161

Query: 325 TSSI 314
             +I
Sbjct: 162 DEAI 165


>03_02_0500 -
           8915300-8915349,8915567-8915717,8916308-8916516,
           8916592-8916808,8917515-8917722,8917839-8917939
          Length = 311

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 19/51 (37%), Positives = 29/51 (56%)
 Frame = +3

Query: 306 CTRIDEVAADR*AVTGAHG*QRVTAS*RELEMPNR*ERI*RVLKALFGSKL 458
           C+R +E  ++R     A G  RVT S  +L + ++ ER+ R +  LFG KL
Sbjct: 51  CSRKEEELSERLKEWEARG-FRVTTSVCDLSVRDQRERLLRQVADLFGGKL 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,256,320
Number of Sequences: 37544
Number of extensions: 182991
Number of successful extensions: 332
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)