Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30353
         (424 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   0.86 
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    23   3.5  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    23   3.5  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.4 bits (53), Expect = 0.86
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 174  NPLLNKRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANS-GPRRRMSSN 317
            +PLLN+R R+ Q++ S    +G +   S   +   GA S GP     SN
Sbjct: 1487 SPLLNRRQRKKQHTESSDDENGGSGGGS--GSGAGGAGSAGPNHSSPSN 1533


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 292 PLFAPFVDVFLQLFIQVRPLLVLTLDEFWI 203
           PL  P  DVFL  F  V P     + E W+
Sbjct: 12  PLSYPQTDVFLVCFSVVSPSSFENVKEKWV 41


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 21  TSLCCRSKNQCRVTE*PTS 77
           T +CC S+ Q R +  PTS
Sbjct: 74  TLVCCASEQQTRTSSFPTS 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,771
Number of Sequences: 2352
Number of extensions: 6074
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)