Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30352
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 156 2e-37
UniRef50_A4NCI4 Cluster: Transposase; n=1; Haemophilus influenza... 34 2.2
UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 - Bo... 33 2.9
UniRef50_Q4QHN5 Cluster: Putative uncharacterized protein; n=3; ... 33 2.9
UniRef50_UPI0000E82101 Cluster: PREDICTED: hypothetical protein,... 33 5.1
UniRef50_A7LK32 Cluster: VP22; n=4; Alphaherpesvirinae|Rep: VP22... 33 5.1
UniRef50_Q5NQ23 Cluster: Dehydrogenase; n=1; Zymomonas mobilis|R... 32 6.8
UniRef50_Q8MQE9 Cluster: Putative uncharacterized protein; n=2; ... 32 6.8
UniRef50_UPI00005A4A2D Cluster: PREDICTED: similar to Ig lambda ... 32 8.9
UniRef50_A5ZPB6 Cluster: Cation-transporting ATPase; n=1; Rumino... 32 8.9
UniRef50_A7RGR8 Cluster: Predicted protein; n=1; Nematostella ve... 32 8.9
UniRef50_A0DMZ3 Cluster: Chromosome undetermined scaffold_57, wh... 32 8.9
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
protein; n=25; Arthropoda|Rep: Endonuclease and reverse
transcriptase-like protein - Bombyx mori (Silk moth)
Length = 986
Score = 156 bits (379), Expect = 2e-37
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +3
Query: 297 PKYQLLPFDSIQRRAVRIVDNPILTDRLEPLGLRRDFGSLCILYRMFHGECSEELFEMIP 476
PKYQLLPFDSIQRRAVRIVDNP LTDRLEPLGLRRDFGSLCILYRMFHGECSEELFEMIP
Sbjct: 841 PKYQLLPFDSIQRRAVRIVDNPGLTDRLEPLGLRRDFGSLCILYRMFHGECSEELFEMIP 900
Query: 477 ASRFYHRTARHRS 515
ASRFYHRTARHRS
Sbjct: 901 ASRFYHRTARHRS 913
>UniRef50_A4NCI4 Cluster: Transposase; n=1; Haemophilus influenzae
3655|Rep: Transposase - Haemophilus influenzae 3655
Length = 574
Score = 33.9 bits (74), Expect = 2.2
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = -2
Query: 335 PLYGVK--WKKLVFGSINSIRKPDVTAAAKGSSSLISYITHKYYSIT*FYAGGILHLAYG 162
P+ G++ W + FG + KP A + G + + K+ S+ FYAG ++
Sbjct: 279 PMLGIELLWTSVQFGKGHGQAKPIERAFSHGG---LGELVDKHPSLAGFYAGENVYNKPD 335
Query: 161 RLFIGHSDLRVHDTFVLRIIDHGQTFFHHSGHTKEEAALVDGFDNARTQDH 9
+ G D +DTF+L I D +TF G E + F +D+
Sbjct: 336 N-YNGGKDGVDYDTFILAIEDGIRTFNEREGRQTEICQGIYSFSQVFERDY 385
>UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 -
Bombyx mori (Silk moth)
Length = 92
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 507 GGRCDGKNEMPVSSRTI 457
GGRCDGKNE VSS+TI
Sbjct: 8 GGRCDGKNETMVSSQTI 24
>UniRef50_Q4QHN5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 538
Score = 33.5 bits (73), Expect = 2.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 316 HLTPYRGGPFGLSIIPFSRIVWSLWVCGG 402
HL P R G + +++PF+R++ LWV GG
Sbjct: 260 HLLPLRSGTYD-AVVPFARLLLQLWVRGG 287
>UniRef50_UPI0000E82101 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Gallus gallus|Rep: PREDICTED: hypothetical
protein, partial - Gallus gallus
Length = 136
Score = 32.7 bits (71), Expect = 5.1
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 489 KNEMPVSSRTIPQSTPHGT-YGTKYRGNRSPSADPEAPNDP 370
KN +R P+ TP+GT GT N +P+ APN+P
Sbjct: 83 KNHPKNRTRNAPKETPNGTPNGTPNAPNETPNGTRNAPNEP 123
>UniRef50_A7LK32 Cluster: VP22; n=4; Alphaherpesvirinae|Rep: VP22 -
Human herpesvirus 2 (HHV-2) (Human herpes simplex virus
2)
Length = 302
Score = 32.7 bits (71), Expect = 5.1
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1
Query: 471 SSRTIPQSTPHGTYGTKYRGNRSPSADPEAPNDP*EWDYRQSERP 337
S ++ P+ P GT+ Y G SP ADPE+P D D+R+ P
Sbjct: 6 SVKSCPREAPRGTHEELYYGPVSP-ADPESPRD----DFRRGAGP 45
>UniRef50_Q5NQ23 Cluster: Dehydrogenase; n=1; Zymomonas mobilis|Rep:
Dehydrogenase - Zymomonas mobilis
Length = 442
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 4 YLWSCVRALSKPSTSAASSFVCPEWWKNVWPWS 102
Y W V A ++PS+S A+ PE+ K W WS
Sbjct: 324 YGWPIVTAAAEPSSSTATMPTHPEFTKPKWSWS 356
>UniRef50_Q8MQE9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 642
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -2
Query: 452 RALPMEHTVQNTEGTEVPPQTQRLQTIRENGI--IDNPNGPPLYGVK 318
R+ +H T + P ++ Q + +N I +DN NGPPL VK
Sbjct: 392 RSKKEDHAASTTSVLQAPNYSELKQMLEKNNILKVDNENGPPLKRVK 438
>UniRef50_UPI00005A4A2D Cluster: PREDICTED: similar to Ig lambda
chain V-I region BL2 precursor; n=2; Canis lupus
familiaris|Rep: PREDICTED: similar to Ig lambda chain
V-I region BL2 precursor - Canis familiaris
Length = 284
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 492 GKNEMPVSSRTIPQSTPHGTYGTKYRGNRSPSADPEAPNDP*EWDYRQSERPSSV 328
G+ + +S T+P S H +G R P A AP WD +P+SV
Sbjct: 174 GEEALGLSQATVPPSRSHPPWGLLTRPAHQPQAMVPAPAAQGSWDQSVLTQPASV 228
>UniRef50_A5ZPB6 Cluster: Cation-transporting ATPase; n=1;
Ruminococcus obeum ATCC 29174|Rep: Cation-transporting
ATPase - Ruminococcus obeum ATCC 29174
Length = 850
Score = 31.9 bits (69), Expect = 8.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 482 RCRYHLEQFLRALPMEHTVQNTEGTEVPPQTQRLQTIRENGII 354
RC+ + E LR L + H+ Q EGTE+P + L + +I
Sbjct: 457 RCQVYAEDGLRVLVLAHSSQMVEGTELPEGLEPLALMLMTDVI 499
>UniRef50_A7RGR8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 638
Score = 31.9 bits (69), Expect = 8.9
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 22 RALSKPSTSAASS-FVCPEWWKNVWPW 99
++LS P+ S + P WWK WPW
Sbjct: 142 KSLSTPAAGGTSRPTLLPRWWKRPWPW 168
>UniRef50_A0DMZ3 Cluster: Chromosome undetermined scaffold_57, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_57,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 91
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 437 EHTVQNTEGTEVPPQTQRLQTIRENG-IIDNPNGPPLYGVKWKKLVFGSINSIRK 276
+ TV+N + P ++ + + EN I +N N P Y +W +L F S S+ K
Sbjct: 33 QSTVKNALHHKYPQRSFTITALLENQRIFNNSNNPKNYSHQWNQLFFCSCTSLNK 87
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,150,759
Number of Sequences: 1657284
Number of extensions: 12178131
Number of successful extensions: 36211
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 35041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36201
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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