Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30351
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 366 e-102
SB_56| Best HMM Match : Actin (HMM E-Value=0) 366 e-102
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 366 e-102
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 365 e-102
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 318 2e-87
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 2e-51
SB_54| Best HMM Match : Actin (HMM E-Value=0) 168 3e-42
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 151 4e-37
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 2e-36
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 139 1e-33
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 2e-23
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 53 2e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 50 1e-06
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 50 1e-06
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 47 8e-06
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.74
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.3
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 29 2.3
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 2.3
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 3.0
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 5.3
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 27 6.9
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 27 9.2
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 27 9.2
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 366 bits (901), Expect = e-102
Identities = 169/172 (98%), Positives = 172/172 (100%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 180
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNW
Sbjct: 20 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 79
Query: 181 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 360
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV
Sbjct: 80 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 139
Query: 361 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 516
LSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 191
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 366 bits (901), Expect = e-102
Identities = 169/172 (98%), Positives = 172/172 (100%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 180
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNW
Sbjct: 20 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 79
Query: 181 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 360
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV
Sbjct: 80 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 139
Query: 361 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 516
LSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 191
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 366 bits (901), Expect = e-102
Identities = 169/172 (98%), Positives = 172/172 (100%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 180
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 181 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 360
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 140
Query: 361 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 516
LSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 141 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 365 bits (899), Expect = e-102
Identities = 168/172 (97%), Positives = 172/172 (100%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 180
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 181 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 360
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 140
Query: 361 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 516
LSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMK
Sbjct: 141 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMK 192
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 318 bits (781), Expect = 2e-87
Identities = 148/153 (96%), Positives = 151/153 (98%), Gaps = 2/153 (1%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 180
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 181 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 360
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 140
Query: 361 LSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 453
LSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 141 LSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 198 bits (484), Expect = 2e-51
Identities = 91/175 (52%), Positives = 124/175 (70%), Gaps = 3/175 (1%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 174
G+AG + P +FPS+VGRP R + + KD VGDEA R +L + YP+++GI+
Sbjct: 21 GYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVR 80
Query: 175 NWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 351
NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++MFE + +Y+AI
Sbjct: 81 NWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAI 140
Query: 352 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 516
QAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K
Sbjct: 141 QAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIK 195
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 168 bits (408), Expect = 3e-42
Identities = 76/108 (70%), Positives = 90/108 (83%)
Frame = +1
Query: 193 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 372
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 373 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 516
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQR 2236
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQ 66
G + D++PR VFP+IVGRPRH+
Sbjct: 2109 GLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 151 bits (365), Expect = 4e-37
Identities = 63/90 (70%), Positives = 83/90 (92%)
Frame = +1
Query: 241 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 420
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 421 SHTVPIYEGYALPHAILRLDLAGRDLTDYL 510
SH+VPIYEG+A+PH+I+R D+AGRD++ YL
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYL 215
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 149 bits (360), Expect = 2e-36
Identities = 67/71 (94%), Positives = 68/71 (95%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 180
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNW
Sbjct: 20 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 79
Query: 181 DDMEKIWHHTF 213
DDMEKI TF
Sbjct: 80 DDMEKIMFETF 90
Score = 147 bits (357), Expect = 4e-36
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = +1
Query: 286 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 465
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 466 ILRLDLAGRDLTDYLMK 516
I+RLDLAGRDLTDYLMK
Sbjct: 138 IIRLDLAGRDLTDYLMK 154
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 139 bits (336), Expect = 1e-33
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +1
Query: 307 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 486
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 487 GRDLTDYLMK 516
GRDLTDYLMK
Sbjct: 61 GRDLTDYLMK 70
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (252), Expect = 2e-23
Identities = 47/117 (40%), Positives = 77/117 (65%)
Frame = +1
Query: 151 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 330
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 331 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 501
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFIT 119
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 79 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 258
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 388 TGIVLDSGDGVSHTVPI 438
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
Frame = +1
Query: 346 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 501
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 502 DYLMK 516
++ +
Sbjct: 100 FFVQQ 104
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +1
Query: 352 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 510
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENL 819
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRGILTL 144
GFAGD PR + P++VG P+ +++G + KD GD A +K G++ L
Sbjct: 715 GFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 50.0 bits (114), Expect = 1e-06
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY--PIEHGIIT 174
GFA + APR++ P+ + + + + ++ ++GD+ + + L Y P + G +
Sbjct: 248 GFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDYSALFYVLPFQKGFLV 299
Query: 175 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 354
NWD ++IW +TF E + M +I+FE +N A+
Sbjct: 300 NWDVEKQIWDYTFGKE--------------------GLEDAMDEILFEEYNFKALSRTTA 339
Query: 355 AVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 474
A LS Y S +V+D+G +H VP++ G + A+ R
Sbjct: 340 AQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVRR 385
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 47.2 bits (107), Expect = 8e-06
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQ 66
GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1371 GFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 196 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 375
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 376 SGRTTGIV 399
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 142 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 294
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.74
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 283 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 399
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 303 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 124
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 123 AL 118
++
Sbjct: 214 SV 215
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 14 TTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 118
TT+P P +PSWV + + W TW RP
Sbjct: 50 TTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -2
Query: 488 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 309
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 308 IWVIFSLLALGLR 270
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3
Query: 45 RGSPSPPGRDGRYGPERLLRG*RGPEQERYPHSEVPH 155
RG P PGRDG G + G RGP E+ E H
Sbjct: 420 RGEPGAPGRDGAPGAQ----GERGPRGEQGKQGEKGH 452
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -1
Query: 63 VARATHDGREDGAGRVVAGET 1
+AR+ DG E+G+G +V+GET
Sbjct: 1 MARSADDGGENGSGSIVSGET 21
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 2.3
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 428 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 276
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 275 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 111
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 471 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 373
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 507 VVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 385
+V Q + GV S G+G G TISG D+GG
Sbjct: 1481 IVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 286 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 435
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 271 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 399
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -2
Query: 437 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 261
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 260 VSSTGCSSGATRSSL*KVW 204
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -2
Query: 362 STAWMATYMAGELKVSNMIWV---IFSLLALGL 273
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -1
Query: 513 HEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEHDTGGTTGGVQ 367
H++ + +TS V+ + G + D + T S E +T GTTGG Q
Sbjct: 151 HQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEANTAGTTGGTQ 203
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +3
Query: 33 LPVHRGSPS-PPGRDGRYGP 89
+P + G+P+ PPGRDG GP
Sbjct: 1705 IPGYPGAPAGPPGRDGPMGP 1724
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 422 PTPYPSTKVTLCPTPSSVW 478
PTP+P+T V +P S+W
Sbjct: 1373 PTPFPTTPVPPTTSPPSIW 1391
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,421,994
Number of Sequences: 59808
Number of extensions: 347722
Number of successful extensions: 1433
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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