BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30351
(516 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 367 e-103
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 367 e-103
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 367 e-103
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 357 e-100
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 29 0.12
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 26 0.87
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 26 0.87
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 26 0.87
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 26 0.87
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 26 0.87
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 26 0.87
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 25 1.1
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 25 1.1
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 2.6
DQ080821-1|AAY89467.1| 170|Anopheles gambiae transcription fact... 23 8.1
DQ080820-1|AAY89466.1| 170|Anopheles gambiae transcription fact... 23 8.1
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 8.1
CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein. 23 8.1
AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine... 23 8.1
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 367 bits (903), Expect = e-103
Identities = 170/172 (98%), Positives = 172/172 (100%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 180
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 181 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 360
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 140
Query: 361 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 516
LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 141 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 367 bits (903), Expect = e-103
Identities = 170/172 (98%), Positives = 172/172 (100%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 180
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 181 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 360
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 140
Query: 361 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 516
LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 141 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 367 bits (903), Expect = e-103
Identities = 170/172 (98%), Positives = 172/172 (100%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 180
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 181 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 360
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 140
Query: 361 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 516
LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 141 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 357 bits (878), Expect = e-100
Identities = 164/172 (95%), Positives = 170/172 (98%)
Frame = +1
Query: 1 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNW 180
GFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQSKRGILTLKYPIEHGIITNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQSKRGILTLKYPIEHGIITNW 80
Query: 181 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 360
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKMTQIMFETF +PA+YVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFAAPAVYVAIQAV 140
Query: 361 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 516
LSLYASGRTTG+VLDSGDGVSHTVPIYEGYALPHAILR+DLAGRDLTDYLMK
Sbjct: 141 LSLYASGRTTGVVLDSGDGVSHTVPIYEGYALPHAILRMDLAGRDLTDYLMK 192
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 28.7 bits (61), Expect = 0.12
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 48 GSPSPPGRDGRYGPERL--LRG*RGPE 122
G P P GRDG +GP L +G RG E
Sbjct: 344 GQPGPRGRDGNFGPVGLPGQKGDRGSE 370
Score = 22.6 bits (46), Expect = 8.1
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 45 RGSPSPPGRDGRYGP--ERLLRG*RGPEQER 131
RG P PGR G G +R G RG + E+
Sbjct: 310 RGEPGEPGRSGEKGQAGDRGQVGERGHKGEK 340
Score = 22.6 bits (46), Expect = 8.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 36 PVHRGSPSPPGRDGRYGP 89
P RG P P G G GP
Sbjct: 624 PGLRGEPGPKGEPGLLGP 641
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.8 bits (54), Expect = 0.87
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 410 EMVSPTPYPSTKVTLCPTPSSVWT 481
E + T +P+T T PT S WT
Sbjct: 125 EATTTTTFPTTTTTSAPTTPSQWT 148
Score = 22.6 bits (46), Expect = 8.1
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = -2
Query: 131 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKT 30
P S+PT S W PTI TP W T T
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPT 169
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.8 bits (54), Expect = 0.87
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 410 EMVSPTPYPSTKVTLCPTPSSVWT 481
E + T +P+T T PT S WT
Sbjct: 125 EATTTTTFPTTTTTSAPTTPSQWT 148
Score = 22.6 bits (46), Expect = 8.1
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = -2
Query: 131 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKT 30
P S+PT S W PTI TP W T T
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPT 169
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.8 bits (54), Expect = 0.87
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 410 EMVSPTPYPSTKVTLCPTPSSVWT 481
E + T +P+T T PT S WT
Sbjct: 125 EATTTTTFPTTTTTSAPTTPSQWT 148
Score = 22.6 bits (46), Expect = 8.1
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = -2
Query: 131 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKT 30
P S+PT S W PTI TP W T T
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPT 169
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.8 bits (54), Expect = 0.87
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 410 EMVSPTPYPSTKVTLCPTPSSVWT 481
E + T +P+T T PT S WT
Sbjct: 125 EATTTTTFPTTTTTSAPTTPSQWT 148
Score = 22.6 bits (46), Expect = 8.1
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = -2
Query: 131 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKT 30
P S+PT S W PTI TP W T T
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPT 169
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.8 bits (54), Expect = 0.87
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 410 EMVSPTPYPSTKVTLCPTPSSVWT 481
E + T +P+T T PT S WT
Sbjct: 125 EATTTTTFPTTTTTSAPTTPSQWT 148
Score = 22.6 bits (46), Expect = 8.1
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = -2
Query: 131 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKT 30
P S+PT S W PTI TP W T T
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPT 169
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 25.8 bits (54), Expect = 0.87
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 410 EMVSPTPYPSTKVTLCPTPSSVWT 481
E + T +P+T T PT S WT
Sbjct: 125 EATTTTKFPTTTTTSAPTTPSQWT 148
Score = 23.4 bits (48), Expect = 4.6
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = -2
Query: 137 RIPLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKT 30
+ P S+PT S W PTI TP W T T
Sbjct: 131 KFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPT 169
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.4 bits (53), Expect = 1.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 410 EMVSPTPYPSTKVTLCPTPSSVWT 481
E + T +P+T T PT S WT
Sbjct: 124 EATTTTRFPTTTTTSAPTTPSQWT 147
Score = 24.6 bits (51), Expect = 2.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = -2
Query: 137 RIPLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKT 30
R P S+PT S W PTI TP W T T
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPT 168
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.4 bits (53), Expect = 1.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 410 EMVSPTPYPSTKVTLCPTPSSVWT 481
E + T +P+T T PT S WT
Sbjct: 124 EATTTTRFPTTTTTSAPTTPSQWT 147
Score = 24.6 bits (51), Expect = 2.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = -2
Query: 137 RIPLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKT 30
R P S+PT S W PTI TP W T T
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPT 168
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.2 bits (50), Expect = 2.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 36 PVHRGSPSPPGRDGRYGPERLLRG*RGP 119
P +G P PPG +G G ++ L G GP
Sbjct: 712 PQRKGPPGPPGFNGPKG-DKGLPGLAGP 738
Score = 23.8 bits (49), Expect = 3.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 45 RGSPSPPGRDGRYGPERLLRG*RGPEQER 131
RG P P G G GP + G +G + ER
Sbjct: 620 RGLPGPQGEKGDQGPPGFI-GPKGDKGER 647
Score = 23.4 bits (48), Expect = 4.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 45 RGSPSPPGRDGRYGPERLLRG*RGPEQERYP 137
+G+ PPG G GP R L G RG + P
Sbjct: 41 QGNAGPPGAPGPVGP-RGLTGHRGEKGNSGP 70
Score = 23.4 bits (48), Expect = 4.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 GSPSPPGRDGRYGPE 92
G+P PPG G GP+
Sbjct: 146 GTPGPPGYPGDVGPK 160
Score = 23.0 bits (47), Expect = 6.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 45 RGSPSPPGRDGRYGPERL 98
+G P PG+ GR GP L
Sbjct: 549 KGLPGRPGKTGRDGPPGL 566
>DQ080821-1|AAY89467.1| 170|Anopheles gambiae transcription factor
3C protein.
Length = 170
Score = 22.6 bits (46), Expect = 8.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 58 RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 213
RH ++ KDSY EA+ KYP+ DD++ W F
Sbjct: 119 RHACLLNTTSSKDSYHEIEAR--------KYPVLRYRFETMDDLQNYWDRLF 162
>DQ080820-1|AAY89466.1| 170|Anopheles gambiae transcription factor
3C protein.
Length = 170
Score = 22.6 bits (46), Expect = 8.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 58 RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 213
RH ++ KDSY EA+ KYP+ DD++ W F
Sbjct: 119 RHACLLNTTSSKDSYHEIEAR--------KYPVLRYRFETMDDLQNYWDRLF 162
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 22.6 bits (46), Expect = 8.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 464 AWGRA*PS*MGTVWETPSPESSTIPVVRP 378
A G+A + +GT TP+ ++ PV RP
Sbjct: 13 ATGKAASAVIGTTQSTPATAAAPQPVQRP 41
>CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein.
Length = 295
Score = 22.6 bits (46), Expect = 8.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 464 AWGRA*PS*MGTVWETPSPESSTIPVVRP 378
A G+A + +GT TP+ ++ PV RP
Sbjct: 13 ATGKAASAVIGTTQSTPATAAAPQPVQRP 41
>AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine
protease protein.
Length = 405
Score = 22.6 bits (46), Expect = 8.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 308 IWVIFSLLALGLRGASV 258
IW I +++LG+RG V
Sbjct: 366 IWYITGIVSLGVRGCGV 382
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,219
Number of Sequences: 2352
Number of extensions: 10603
Number of successful extensions: 70
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -