Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30343
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    25   0.30 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   2.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   2.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   6.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.6  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.6  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   8.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.6  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 57  NYDNINIVIGNESCDLDSAVCSIV 128
           NYD  N VI +  CD  SA+C ++
Sbjct: 28  NYDFENFVIISPRCDKISAICFLL 51


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 49  FNLFTMLFKNSFIVCS 2
           +NL +  F+  FI+CS
Sbjct: 351 YNLMSSKFRTGFIICS 366


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 15/62 (24%), Positives = 23/62 (37%)
 Frame = -3

Query: 328 SFLKIKSPSVIPSFLKIYMTSVFRAKSCLTMFNIGTKISSLDEAPRLSFVHTLHFI*LCC 149
           S+LKI        F +I    +  A   LT+      +     +   +F H   F  +CC
Sbjct: 24  SYLKIYHKEKYRKFCRILKYFII-AIYVLTILTSSVTLHVCFNSYMYAFTHIFFFFAICC 82

Query: 148 QF 143
            F
Sbjct: 83  DF 84


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 147 NLNIERRQWSKPLNLGRSFRCQ*RY 73
           NLN    Q   PLNLG  F  Q ++
Sbjct: 197 NLNPPVTQTQLPLNLGLDFPYQGKF 221


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 117 CSIVYALYLNWQ 152
           C I++ +YL WQ
Sbjct: 16  CCILFFIYLYWQ 27


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 304 KVI*FLETIMTYA 342
           KVI FL+ ++TYA
Sbjct: 98  KVIRFLQVVVTYA 110


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 453 VVCDQ*SRRQRVTEKHH*QPVHDD 382
           ++ D+    QR+  + + QPVHD+
Sbjct: 28  LMLDKILEAQRLLSEQNNQPVHDE 51


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 453 VVCDQ*SRRQRVTEKHH*QPVHDD 382
           ++ D+    QR+  + + QPVHD+
Sbjct: 28  LMLDKILEAQRLLSEQNNQPVHDE 51


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 453 VVCDQ*SRRQRVTEKHH*QPVHDD 382
           ++ D+    QR+  + + QPVHD+
Sbjct: 28  LMLDKILEAQRLLSEQNNQPVHDE 51


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 109 ESRSQLSLPITILMLS*LLDFNLFTMLFKNS 17
           +S + + L +++LM      FN +T+LF  S
Sbjct: 49  KSYTYIKLVVSVLMDFIAYFFNFWTILFSRS 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,688
Number of Sequences: 336
Number of extensions: 2449
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)