Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30341
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    34   0.003
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    28   0.16 
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            28   0.16 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.21 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    27   0.28 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   0.38 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.1  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   1.5  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   2.6  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   6.1  
U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles ...    23   6.1  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   6.1  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   6.1  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   6.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.1  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 33.9 bits (74), Expect = 0.003
 Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
 Frame = +2

Query: 101  VNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGG 280
            + +E       + + +DKI  ++D++E+ +   ++   E+  L  +  +L E LEE +  
Sbjct: 919  LTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLA 978

Query: 281  AESQFEINRKRDTELLKLRKLLED---VHLESEETAHLLKKKNQE 406
             E   E +     E++ L+K   +     LE E+    ++ K QE
Sbjct: 979  IEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTIETKLQE 1023



 Score = 23.0 bits (47), Expect = 6.1
 Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
 Frame = +2

Query: 5    ADCRPX--TRTPNMSAMAKT-SKYTYRSSGGGTTDVNIEYSADLSALSRLEDKIRLIQDD 175
            A+C+    + +    AM K   +YT + +    + V +     ++ L +  DK+      
Sbjct: 860  AECKQAFDSSSTKADAMQKNVDRYTEQINEITNSKVKV-LQTKINGLGKQIDKLSANISK 918

Query: 176  LESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDV 355
            L  E +  +R  ++  D   ++  + + +E A+       +   + + E  KLR+ LE++
Sbjct: 919  LTVEIKTSERNVQKSKD---KINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEM 975

Query: 356  HLESEETAHLLKKKNQEIV 412
             L  E+         +EIV
Sbjct: 976  KLAIEKAHEGSSSIKKEIV 994


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +2

Query: 146 EDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAE 274
           + K R I+ D + + E+ ++IERE+AD S  +  L E  ++ E
Sbjct: 125 QSKQRAIEKDRKKKDEIHRQIERERADRSA-IDNLLEESKQRE 166


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +2

Query: 146 EDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAE 274
           + K R I+ D + + E+ ++IERE+AD S  +  L E  ++ E
Sbjct: 125 QSKQRAIEKDRKKKDEIHRQIERERADRSA-IDNLLEESKQRE 166


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.21
 Identities = 16/67 (23%), Positives = 35/67 (52%)
 Frame = +2

Query: 146 EDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTEL 325
           E + R  ++  + E+E R++ ERE+     +  +  +R +E E  A  + E  R+R+ E 
Sbjct: 476 EQREREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERERERERER 535

Query: 326 LKLRKLL 346
            ++  ++
Sbjct: 536 ERMMHMM 542



 Score = 26.2 bits (55), Expect = 0.66
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
 Frame = +2

Query: 179 ESERELRQRIEREKADLSVQVIQLSERLE----EAEGGAESQFEINRKRDTELLKLRKLL 346
           E ERELR++ ERE+ +   +  +  E+ E    + E     + +  ++R+ E  + R+  
Sbjct: 469 EKERELREQREREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERE 528

Query: 347 EDVHLESEETAHLL 388
            +   E E   H++
Sbjct: 529 RERERERERMMHMM 542



 Score = 26.2 bits (55), Expect = 0.66
 Identities = 18/72 (25%), Positives = 38/72 (52%)
 Frame = +2

Query: 146 EDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTEL 325
           E ++R  ++  + E+E R++ +REK +   Q  +  +R E  +   E + E  R+R+ E 
Sbjct: 471 ERELREQREREQREKEQREKEQREKEERERQQREKEQR-EREQREKEREREAARERERER 529

Query: 326 LKLRKLLEDVHL 361
            + R+    +H+
Sbjct: 530 ERERERERMMHM 541


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.5 bits (58), Expect = 0.28
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
 Frame = +2

Query: 65   YTYRSSGGGTTDVNI-----EYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADL 229
            +TY S  G  T  NI     E +     L + +  +   +   E ER LRQ+ E E+ + 
Sbjct: 792  FTYLSVHGDKTRYNIALAETEANQCQDLLQQAQYHVSRARKIDEEERSLRQKQELEREEF 851

Query: 230  SVQVIQLSERLEEAEGGAESQFEINRKRDTELLK 331
              +  +   R+EE    A  +  + R+   E  K
Sbjct: 852  KRRQAEDRRRMEEMRRKAHEEMLLKRQEYKEKTK 885


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 0.38
 Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
 Frame = +2

Query: 110  EYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEE------- 268
            E  A    L+ +   I  I+  +ES +  RQ I  +    S+++  L   +++       
Sbjct: 907  EVQALAKELAAIHQSIANIESRIESMKSKRQTILMQAKMESIEIPLLQGSMDDIGQQEYA 966

Query: 269  AEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHLLKKKNQEIVIDFQEQIDQLTK 448
            A+GG  S +E   + + +  KL       HL++      +KK    +  + Q ++D L K
Sbjct: 967  ADGG--SAYERESRIEIDYSKLEH-----HLKNLSDPDQIKKSGDSLAKELQSKLDTLEK 1019

Query: 449  TKARAEKEKSK 481
             +    K   K
Sbjct: 1020 IQTPNMKAMQK 1030



 Score = 25.8 bits (54), Expect = 0.87
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
 Frame = +2

Query: 104  NIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADL--SVQVIQLSERLEEAEG 277
            N+E+         ++   R +QDD +S    +Q   R++ ++    + I+L ++ + A  
Sbjct: 832  NLEFERSKDTSKNVQRWERAVQDDEDSLETFKQAEARQRQEIEKDKEKIELMKQEKAAHK 891

Query: 278  GAESQFEIN-RKRDTELLKLRKLLEDVH---LESEETAHLLKKKNQEIVI 415
                Q E    K   E+  L K L  +H      E     +K K Q I++
Sbjct: 892  TLVDQMEEEMAKARREVQALAKELAAIHQSIANIESRIESMKSKRQTILM 941


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 26/119 (21%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
 Frame = +2

Query: 155  IRLIQDDLESE-RELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLK 331
            +++  D+L+   ++ R++++RE  +L+    +  ERL+E       + +  +K   ELL 
Sbjct: 703  LQVSMDELKRHTQQRREQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLT 762

Query: 332  LRKLLEDV-----HLESEET--------AHLLKKKNQEIVIDFQEQIDQLTKTKARAEK 469
              + L+ +       E+EET        +  +  K Q+ + + Q ++DQ+ +T  + E+
Sbjct: 763  NEQQLQQLAGVVFEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQ 821


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 24/131 (18%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
 Frame = +2

Query: 98  DVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQV-IQLSERLEEAE 274
           D   +    +  + RLE++I+L++  +E+  E  +  +RE  +      ++ +E  EE  
Sbjct: 77  DAKADNETTVGIVKRLEEQIQLLRLQMEASNEQLKEAQREAREAREDARVREAEHREELR 136

Query: 275 GGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHLLKKKNQEIVIDFQEQIDQLTKTK 454
              E  F     +        +L     L+ E+   LL++   +   + ++Q++   + +
Sbjct: 137 KEKE-LFNALLAQTLGGTSGARLESQQELQREQ--ELLRRMESQQRQEQRQQLEDQQRQR 193

Query: 455 ARAEKEKSKFQ 487
            R +++K + Q
Sbjct: 194 WRQQQQKQQRQ 204


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 41   SAMAKTSKYTYRSSGGGTTDVNIEYSADLSALSRLEDK 154
            ++   T K   R SGGG   VN + +A LSA S   D+
Sbjct: 1133 ASSTNTPKSAGRRSGGGGGPVNPQTTALLSASSTDSDE 1170


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -2

Query: 290 GSRLRLQLPQASQTVESLARSNLPSL 213
           G+R+ L+LP++ +   +L  SN+ S+
Sbjct: 351 GTRINLRLPESVEFFGNLLNSNVDSV 376


>U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles
           gambiae putativearylphorin precursor, mRNA, partial cds.
           ).
          Length = 207

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -2

Query: 290 GSRLRLQLPQASQTVESLARSNLPSL 213
           G+R+ L+LP++ +   +L  SN+ S+
Sbjct: 19  GTRINLRLPESVEFFGNLLNSNVDSV 44


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -2

Query: 290 GSRLRLQLPQASQTVESLARSNLPSL 213
           G+R+ L+LP++ +   +L  SN+ S+
Sbjct: 351 GTRINLRLPESVEFFGNLLNSNVDSV 376


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -2

Query: 290 GSRLRLQLPQASQTVESLARSNLPSL 213
           G+R+ L+LP++ +   +L  SN+ S+
Sbjct: 351 GTRINLRLPESVEFFGNLLNSNVDSV 376


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -2

Query: 290 GSRLRLQLPQASQTVESLARSNLPSL 213
           G+R+ L+LP++ +   +L  SN+ S+
Sbjct: 351 GTRINLRLPESVEFFGNLLNSNVDSV 376


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 261  LRKLKAEPRASSRSTESVTPNSSSYANYWKMSIWSQ 368
            L++ K EP   + S++S  P    +  + K  +W++
Sbjct: 1562 LKRGKIEPNGVASSSQSPAPVRREFVMHNKAPMWNE 1597


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,666
Number of Sequences: 2352
Number of extensions: 7102
Number of successful extensions: 29
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)