Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30341
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.5  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   3.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   10.0 

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 17  PXTRTPNMSAMAKTSKYTYRSSGGGT 94
           P  RTP++ + + T K   +++G G+
Sbjct: 566 PLARTPSVMSASSTCKKDKKNAGSGS 591


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -1

Query: 465 SALALVLVSWS-ICSWKSITISWFFFLSRW 379
           S  ALV+ SW+   SW+ IT ++F+F  R+
Sbjct: 195 SGYALVVYSWAKNDSWR-ITHNFFYFDPRY 223


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 223 CLLSFNPLTQLSFGFQIILDETNLVLQPGEST 128
           CL+S+NPL Q     + + ++   +L+ G +T
Sbjct: 429 CLISWNPLMQPKQPIK-LFEQWKSILESGTTT 459


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 13/65 (20%), Positives = 34/65 (52%)
 Frame = +2

Query: 212 REKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHLLK 391
           +EK+  +    Q +E+L + E  +++  E+N K++   +  R   +    E++E +++  
Sbjct: 59  KEKSKNNHHCNQDTEKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECENKEKSNVCL 118

Query: 392 KKNQE 406
           K  ++
Sbjct: 119 KFEEQ 123


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = +2

Query: 32  PNMSAMAKTSKYTYRSSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLES 184
           P   A +  S     +S GG  D N+   A L+  S L+  +      L S
Sbjct: 242 PASPADSGVSDVESSTSSGGNEDANLLLKARLNPNSSLQPSLASHHSHLSS 292


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,327
Number of Sequences: 438
Number of extensions: 1946
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)