Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30339
         (438 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574...    30   0.71 
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455...    28   3.8  
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482...    27   6.6  
04_04_1212 - 31786063-31786195,31786275-31786398,31786486-317865...    27   6.6  
03_06_0241 - 32587492-32587581,32587673-32587750,32588502-32589422     27   6.6  
03_02_1022 + 13260647-13260834,13260965-13261070,13262052-132621...    27   6.6  
02_05_0579 + 30114127-30114177,30114691-30115386,30115883-301160...    27   8.7  
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313...    27   8.7  

>08_02_1236 + 25454371-25456801,25456891-25457177,25457258-25457416,
            25457561-25457740,25457823-25458017,25459059-25459157,
            25459508-25460137,25460250-25460591
          Length = 1440

 Score = 30.3 bits (65), Expect = 0.71
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +3

Query: 75   AVDEKKRLEEANKAKQAEIDRKRAEVRKRMEEA 173
            A  E+ RLE+  KAK+AE +RKR +  K +E A
Sbjct: 1283 AEKERLRLEQKAKAKEAE-ERKRRKAEKALERA 1314


>07_03_0356 -
           17142019-17142899,17145251-17145290,17145381-17145512,
           17145762-17145815,17145913-17145993,17146860-17146955,
           17147439-17147611,17147750-17147823,17148515-17148622,
           17148693-17148868,17149305-17149352,17150665-17150775,
           17152172-17152226,17153434-17153534,17154176-17154290,
           17155505-17155698
          Length = 812

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = +3

Query: 78  VDEKKRLEEANKAKQAEIDRKRA-EVRKRMEE 170
           + EKK++EEA + K+A   +KRA EV+ + E+
Sbjct: 665 LSEKKKIEEAEERKKAREAKKRAKEVQAQKEK 696


>05_05_0095 -
           22347552-22347696,22347988-22348094,22348114-22348236,
           22348325-22348458,22348766-22348874
          Length = 205

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 81  DEKKRLEEANKAKQAEIDRKRAEVRKRME 167
           DEK RLEE  K ++     K  E +KR E
Sbjct: 152 DEKARLEELKKQRELAAATKEEEKKKREE 180


>04_04_1212 -
           31786063-31786195,31786275-31786398,31786486-31786597,
           31786691-31786822,31786929-31787111,31787351-31787479,
           31787618-31787788,31788142-31788244,31788628-31788737,
           31789158-31789265,31789337-31789512,31790082-31790352,
           31790524-31790738,31791042-31792574,31792665-31792728,
           31793171-31793251
          Length = 1214

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 84  EKKRLEEANKAKQAEIDRKRAEVRKRME 167
           E+   EEA + +QAE +R++ E R  ME
Sbjct: 437 ERLAAEEAERKRQAEEERRKEEERAAME 464


>03_06_0241 - 32587492-32587581,32587673-32587750,32588502-32589422
          Length = 362

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 84  EKKRLEEANKAKQAEIDRKRAEVRKRMEEA 173
           EK+  EEA +  QAE+D +RA       EA
Sbjct: 55  EKEAAEEAARELQAELDAERASAETATSEA 84


>03_02_1022 +
           13260647-13260834,13260965-13261070,13262052-13262169,
           13262271-13262539
          Length = 226

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 84  EKKRLEEANKAKQAEIDRKRAEVRKRMEE 170
           +KKR +EA K  Q +  +KR E RKR ++
Sbjct: 73  KKKRRKEAQKILQEKERKKRIEERKRRKQ 101


>02_05_0579 +
           30114127-30114177,30114691-30115386,30115883-30116083,
           30116354-30116658,30116944-30117073
          Length = 460

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +3

Query: 12  HLVGPSSNSCSRTP*TNTTTMAVDEKKRLEEANKAKQAEIDRKRAEVRKRME 167
           H  GP S+S   +   N  T   ++KKR +   K + A   + RA+VRKR++
Sbjct: 390 HPPGPESSSAGGSR-DNALTRYKEKKKRRKFDKKIRYAS-RKARADVRKRVK 439


>02_03_0351 +
           18030656-18030823,18030963-18031113,18031214-18031309,
           18032027-18032103,18032627-18032706,18033216-18033276,
           18034153-18034220,18034312-18034393,18034552-18034638,
           18035009-18035086,18035336-18035455,18035554-18035730
          Length = 414

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +3

Query: 81  DEKKRLEEANKAKQAEIDRKRAEVRKRMEE 170
           +E+KR+ E  + ++ E  R R ++R+++EE
Sbjct: 230 NERKRMIELRRLEKEEEKRAREKIRQKLEE 259


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,679,022
Number of Sequences: 37544
Number of extensions: 98957
Number of successful extensions: 346
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)