Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30338
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 282 1e-76
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 282 1e-76
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 282 1e-76
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 282 1e-76
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 282 1e-76
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 282 1e-76
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 281 3e-76
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 279 8e-76
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 274 3e-74
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 243 5e-65
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 189 1e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 6e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 6e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 1e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 7e-46
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 157 6e-39
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 126 1e-29
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 106 8e-24
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 71 4e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 50 1e-06
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.052
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.12
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.6
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 6.0
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 6.0
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 6.0
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 6.0
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 6.0
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 8.0
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 282 bits (691), Expect = 1e-76
Identities = 128/129 (99%), Positives = 129/129 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 487
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 488 TQIMFETFN 514
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 282 bits (691), Expect = 1e-76
Identities = 128/129 (99%), Positives = 129/129 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 487
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 488 TQIMFETFN 514
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 282 bits (691), Expect = 1e-76
Identities = 128/129 (99%), Positives = 129/129 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 487
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 488 TQIMFETFN 514
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 282 bits (691), Expect = 1e-76
Identities = 128/129 (99%), Positives = 129/129 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 487
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 488 TQIMFETFN 514
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 282 bits (691), Expect = 1e-76
Identities = 128/129 (99%), Positives = 129/129 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 487
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 488 TQIMFETFN 514
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 282 bits (691), Expect = 1e-76
Identities = 128/129 (99%), Positives = 129/129 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 487
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 488 TQIMFETFN 514
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 281 bits (688), Expect = 3e-76
Identities = 127/129 (98%), Positives = 129/129 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 487
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 488 TQIMFETFN 514
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 279 bits (684), Expect = 8e-76
Identities = 125/129 (96%), Positives = 129/129 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 487
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 488 TQIMFETFN 514
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 274 bits (671), Expect = 3e-74
Identities = 123/127 (96%), Positives = 127/127 (100%)
Frame = +2
Query: 134 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 313
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 314 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 493
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 494 IMFETFN 514
IMFETFN
Sbjct: 122 IMFETFN 128
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 243 bits (595), Expect = 5e-65
Identities = 110/111 (99%), Positives = 111/111 (100%)
Frame = +2
Query: 182 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 361
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 362 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 514
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 115
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 189 bits (460), Expect = 1e-48
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +2
Query: 260 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 439
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 440 LLTEAPLNPKANREKMTQIMFETFN 514
LLTEAPLNPKANREKMTQIMFETFN
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFN 85
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 6e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKI 385
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 6e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKI 385
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 1e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDMEKI 385
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 7e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 307
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 308 SKRGILTLKYPIEHGIVTNWDDM 376
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 157 bits (380), Expect = 6e-39
Identities = 67/122 (54%), Positives = 92/122 (75%), Gaps = 1/122 (0%)
Frame = +2
Query: 152 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 331
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 332 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 508
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 509 FN 514
FN
Sbjct: 131 FN 132
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 126 bits (303), Expect = 1e-29
Identities = 62/123 (50%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
Frame = +2
Query: 152 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 325
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 326 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 502
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 503 ETF 511
E +
Sbjct: 129 EQY 131
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 106 bits (255), Expect = 8e-24
Identities = 59/142 (41%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 271
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 272 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 448
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 449 EAPLNPKANREKMTQIMFETFN 514
E PLN NRE +IMFE+FN
Sbjct: 121 EPPLNTPENREYTAEIMFESFN 142
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 71.3 bits (167), Expect = 4e-13
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 17/142 (11%)
Frame = +2
Query: 137 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 310
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 311 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 445
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 446 TEAPLNPKANREKMTQIMFETF 511
+E+ N +A REK+T+IMFE F
Sbjct: 129 SESSWNDRARREKLTEIMFEKF 150
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +2
Query: 143 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 322
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 323 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 502
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 503 ETF 511
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +2
Query: 143 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 322
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 323 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 502
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 503 ETF 511
+ F
Sbjct: 116 DYF 118
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 35.9 bits (79), Expect = 0.017
Identities = 29/83 (34%), Positives = 33/83 (39%)
Frame = +1
Query: 223 PLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 402
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 403 Q*AACRPRGTPSPAH*GSPQPQG 471
A P G P PA G+P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.052
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +1
Query: 235 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 414
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 415 CRPRGTPSPAH*GSPQPQG 471
P G P PA G+P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.12
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -1
Query: 456 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 277
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 276 CPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 133
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 314 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 159
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 314 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 159
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 182 KAGFAGDDAPRAVFPSIVGRPRHQG 256
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 232 RGKAPPSGRDGRYGTEG 282
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 207 ASSPAKPALHIPEPLSTTNAATSS 136
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 412 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 513
AC GT SPA GSP PQ D + N Q
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1263
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 207 ASSPAKPALHIPEPLSTTNAATSS 136
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 412 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 513
AC GT SPA GSP PQ D + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 207 ASSPAKPALHIPEPLSTTNAATSS 136
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 412 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 513
AC GT SPA GSP PQ D + N Q
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1264
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 207 ASSPAKPALHIPEPLSTTNAATSS 136
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 412 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 513
AC GT SPA GSP PQ D + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 367 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 257
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 335 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 436
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 335 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 436
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,052,681
Number of Sequences: 27780
Number of extensions: 304533
Number of successful extensions: 1158
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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