Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30332
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   1.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   2.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   3.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   4.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   4.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.6  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/52 (21%), Positives = 22/52 (42%)
 Frame = -3

Query: 304 LYSGTRLLQCPHHGAKNSMIQISSEFVTNLSKLLGVSSITSEDES*RAKDPV 149
           L+ G+   + P H      +Q ++   +N +    + +I   D   R  DP+
Sbjct: 97  LFRGSSTPESPEHYYNQKTLQANNNDASNGNLKFSIDNILKADFGRRITDPI 148


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -3

Query: 265 GAKNSMIQISSEFVTNLSKLLGVSSITSEDES*RAKDPVAQSKIP 131
           G+K ++  I ++++ +  K LGVS      +      PV +  IP
Sbjct: 22  GSKKTVFDIPNDYLNDKYKPLGVSLSNRFKQDAEETVPVKKISIP 66


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 348 LDADEHRSVSQKYGVTGFPTIKIFTG 425
           +DA      ++ YGV GF  I  FTG
Sbjct: 279 IDAGMSGPYTKGYGVMGFNEICEFTG 304


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 105 FIMLHGYFIGILLCATGSLALYDSSSDVIELTPSNFDKLVT-NSDEIWI 248
           FI+  G    I LC T    + D  S   +L  S FD L T  +DE+ I
Sbjct: 159 FILWVGILSTIFLCDTILKKVDDILSQAYKLEAS-FDDLATYETDEVQI 206


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 17  FYVFKLHIVVCC 52
           F +F +H++ CC
Sbjct: 173 FIIFTMHLLFCC 184



 Score = 21.0 bits (42), Expect = 6.5
 Identities = 4/13 (30%), Positives = 10/13 (76%)
 Frame = +2

Query: 14  LFYVFKLHIVVCC 52
           ++Y + +H++ CC
Sbjct: 258 IYYFYYMHLLFCC 270


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 148 QRGPWPSTIRLQTLSS 195
           +RGP  ST+R Q +SS
Sbjct: 113 ERGPRNSTLRRQQMSS 128


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 148 QRGPWPSTIRLQTLSS 195
           +RGP  ST+R Q +SS
Sbjct: 113 ERGPRNSTLRRQQMSS 128


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 23  VFKLHIVVCCESRSQKFYNRLF 88
           +F L  V CC++    F  ++F
Sbjct: 154 IFNLVYVYCCDNNFNVFLRQVF 175


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 171 DSSSDVIELTPSNFDKLVTN 230
           ++  +++  T  N DK+VTN
Sbjct: 197 ETQCEIVSDTLRNLDKIVTN 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,055
Number of Sequences: 336
Number of extensions: 2531
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)