Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30332
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 79 4e-16
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 78 9e-16
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 76 4e-15
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 49 4e-07
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 48 8e-07
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 40 2e-04
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 40 3e-04
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 38 7e-04
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 32 0.059
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.31
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 25 5.1
SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyce... 25 5.1
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 6.7
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 6.7
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 25 6.7
SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion cytoch... 25 8.9
SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion ... 25 8.9
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 8.9
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 79.0 bits (186), Expect = 4e-16
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 8/101 (7%)
Frame = +3
Query: 180 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL--D 353
S+ IEL NF K V ++ F+APWCG+CK LVP Y+K A L ++ V A+ D
Sbjct: 31 SNTIELNSKNFRKFVKAKGPSLVV-FYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCD 89
Query: 354 ADEHRSVSQKYGVTGFPTIK-IFTGSK-----HTPYQGQRT 458
AD++R+V +Y V GFPTIK ++ SK T Y G R+
Sbjct: 90 ADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRS 130
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 77.8 bits (183), Expect = 9e-16
Identities = 34/103 (33%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Frame = +3
Query: 174 SSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL-KGIVKVGAL 350
+S++V ++ ++L+T +D++ +++F+APWCGHCK+L PEY+ AA L K + + +
Sbjct: 20 ASAEVPKVNKEGLNELIT-ADKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEV 78
Query: 351 DADEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFVE 476
D E + +Y + G+PT+ +F G + + Y G R + V+
Sbjct: 79 DCTEEGDLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVK 121
Score = 74.9 bits (176), Expect = 6e-15
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Frame = +3
Query: 171 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVG 344
+S D++ L NFD +V + + ++EF+APWCGHCK+L P Y+K A V V
Sbjct: 352 ESQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVA 411
Query: 345 ALDADEHRSVSQKYGVTGFPTIKIF-TGSKHTP--YQGQRTAE 464
+DA E+ +S ++GFPTI F K P Y+G RT E
Sbjct: 412 KIDATEN-DIS--VSISGFPTIMFFKANDKVNPVRYEGDRTLE 451
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 75.8 bits (178), Expect = 4e-15
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Frame = +3
Query: 180 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALD 353
S+V+EL NFDK+V + + ++EF+A WCG+CK L P Y+ + K V++ ++
Sbjct: 140 SNVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKIN 199
Query: 354 ADEHRSVSQKYGVTGFPTIKIF-TGSKHTP--YQGQRTAEGFVE 476
AD + + + V FPTIK F K P Y+G R+ E +E
Sbjct: 200 ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIE 243
Score = 74.5 bits (175), Expect = 8e-15
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Frame = +3
Query: 177 SSDVIELTPSN-FDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVGA 347
+S V+EL N + + S + +IEF+A WCGHCKSL P Y++ + V +G
Sbjct: 19 ASGVVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGK 78
Query: 348 LDADEHRSVSQKYGVTGFPTIKIF--TGSKHTPYQGQRTAEGFVE 476
+DAD H V+ KY +TGFPT+ F GS+ Y R + +
Sbjct: 79 IDADTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARDVDSLTQ 123
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 49.2 bits (112), Expect = 4e-07
Identities = 21/64 (32%), Positives = 40/64 (62%)
Frame = +3
Query: 228 NSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPT 407
++D++ +++F+A WCG CK L P +K + + + A++AD+ ++QK GV PT
Sbjct: 33 SADKVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFI-AVNADKFSDIAQKNGVYALPT 91
Query: 408 IKIF 419
+ +F
Sbjct: 92 MVLF 95
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 48.0 bits (109), Expect = 8e-07
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +3
Query: 186 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEH 365
V +++ S+ K + D++ +++FFA WCG CK++ P++++ + + +D D+
Sbjct: 2 VKQVSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFI-KVDVDQL 60
Query: 366 RSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFVEAALNA 491
++ + GV P+ ++ G K G A+ +EA++ A
Sbjct: 61 SEIAAEAGVHAMPSFFLYKNGEKIEEIVGANPAK--LEASIKA 101
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 39.9 bits (89), Expect = 2e-04
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 249 IEFFAPWCGHCKSLVPEYKKAARALKGIVKVGA-LDADEHRSVSQKYGVTGFPTIKIFTG 425
++ +A WCG CK++ P + + A V A ++ DE R ++ GV PT F
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFEN 83
Query: 426 SK 431
K
Sbjct: 84 GK 85
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 39.5 bits (88), Expect = 3e-04
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +3
Query: 189 IELT-PSNFDKLVTNSDE-IWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 362
+E+T F +++ N E I ++ F+APW CK + + + A+ K V + ++A++
Sbjct: 3 VEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFL-KIEAEK 61
Query: 363 HRSVSQKYGVTGFPTIKIFTGSK 431
+++ + V P + G+K
Sbjct: 62 FSDIAESFDVNAVPLFVLIHGAK 84
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 38.3 bits (85), Expect = 7e-04
Identities = 22/97 (22%), Positives = 40/97 (41%)
Frame = +3
Query: 204 SNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQK 383
++ D +T+ E W I+F++ C C + + A ++G + V ++ + ++
Sbjct: 289 ADIDAALTDK-EGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINCAVSKRACKQ 347
Query: 384 YGVTGFPTIKIFTGSKHTPYQGQRTAEGFVEAALNAA 494
Y + FPT F Y G V A AA
Sbjct: 348 YSIQYFPTFLFFKEEAFVEYVGLPNEGDLVSFAEEAA 384
Score = 32.3 bits (70), Expect = 0.044
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Frame = +3
Query: 189 IELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL---DAD 359
+ LT ++ + V+ W I+++ P CG CK L P + K V+ + D
Sbjct: 29 VPLTDNDLESEVSKGT--WFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVD 86
Query: 360 EHRSVSQKYGVTGFPTIKIFTGS---KHTPYQGQRTAEG----FVEAALN 488
+ +S + PT+ ++ + P+ G T+E FVE LN
Sbjct: 87 CSKELSSCANIRAVPTLYLYQNGEIVEEVPF-GASTSEASLLDFVETHLN 135
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 31.9 bits (69), Expect = 0.059
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 150 TGSLALYDSSSDVIELTPSNFDKLVTNSDEIWIIEFF 260
TGS + SDV+ L+ S L+ SD WII FF
Sbjct: 428 TGSPLAHVLCSDVVNLSVSTVFNLLCGSDTTWIINFF 464
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 29.5 bits (63), Expect = 0.31
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = +3
Query: 270 CGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQG 449
C C + R +K+ ++ DE + + + + FPT ++F G Y G
Sbjct: 209 CEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYNG 268
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 25.4 bits (53), Expect = 5.1
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = -3
Query: 367 LCSSASKAPTFTMPFRALAAFLYSGTRLLQCPHHGAKNSMIQISSEFVTNLSKL 206
LC K T + + F +CPH G KN+ +Q + SK+
Sbjct: 37 LCMECGKNGTTKLLLTVIPYFREVVLMSFECPHCGFKNAQVQHAETIQPEGSKI 90
>SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 138
Score = 25.4 bits (53), Expect = 5.1
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 HCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGV-TGFPTIKIFTG 425
HC KAAR L I++ ++ E S+SQK + PT+ I G
Sbjct: 69 HCTYSQVRGPKAARVLSEILRNRITESKEKLSLSQKEKLFQNLPTVYILHG 119
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 261 APWCGHCKSLVPEYKKAAR 317
A WC HC ++P +K AR
Sbjct: 484 ANWCCHCGYILPLGRKTAR 502
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 219 LVTNSDEIWIIEFFAPW 269
LVTN + IW+I F W
Sbjct: 482 LVTNFNRIWVIHFTTYW 498
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 343 VP*MLMNIEVYHRNMESLASPQLRYSQ 423
VP +L+N+E +H+ ++ A+P + +Q
Sbjct: 134 VPPLLLNVESHHKVLDMCAAPGSKTAQ 160
>SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion
cytochrome c oxidase assembly protein Cox1101,
mitochondrial ribosomal protein
Rsm22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = +2
Query: 74 YNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFVFRRYRADTE 205
++RL++ + R Y Y+ + G+ PL +R++ D +
Sbjct: 353 FSRLYVPRSHRRSSDRSHYSYVVIQKGITRPLNNTTQRFKNDED 396
>SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion
cytochrome c oxidase assembly protein Cox1102,
mitochondrial ribosomal protein
Rsm2202|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = +2
Query: 74 YNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFVFRRYRADTE 205
++RL++ + R Y Y+ + G+ PL +R++ D +
Sbjct: 353 FSRLYVPRSHRRSSDRSHYSYVVIQKGITRPLNNTTQRFKNDED 396
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 24.6 bits (51), Expect = 8.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 77 YKIFEIEIHSTLQCVT*IRKINP 9
Y++FE H L T IR INP
Sbjct: 960 YEVFESRYHRDLSLRTLIRTINP 982
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,124,208
Number of Sequences: 5004
Number of extensions: 43336
Number of successful extensions: 145
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -