Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30330
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    27   0.13 
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    25   0.53 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   2.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   2.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -1

Query: 486 YKGFDNGRRYNPRGCLRVVTFQ*QNE--DF*VTREVHIRG 373
           YK   NG+R NP GC    TF   ++  ++   +E+H +G
Sbjct: 211 YKEIFNGKRKNPNGCDIKATFFVSHKYTNYSAVQEMHRKG 250


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 346 GDTSPSKVHGSCKSQVSVS 290
           G+ + +K  GSCKSQV  S
Sbjct: 52  GEVAVNKCEGSCKSQVQPS 70


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -1

Query: 486 YKGFDNGRRYNPRGCLRVVTFQ*QNE--DF*VTREVHIRG 373
           Y+   NG R NP GC    TF   ++  ++   +++H RG
Sbjct: 203 YEEIFNGNRANPNGCQIRGTFFVSHKYTNYSAVQDLHRRG 242


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -1

Query: 486 YKGFDNGRRYNPRGCLRVVTFQ*QNE--DF*VTREVHIRG 373
           Y+   NG R NP GC    TF   ++  ++   +++H RG
Sbjct: 210 YEEIFNGNRANPNGCQIRGTFFVSHKYTNYSAVQDLHRRG 249


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 52   SGSTLSGECFST*ARKTCWSRPTTTS 129
            S +T S    +T  R+T  +RPTTTS
Sbjct: 1044 SSTTTSPWWTTTTTRRTTTTRPTTTS 1069


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 434 LLPFNDKMKTFELQGKYILEALERGVSEAWGYK 336
           +L FND +K  E+      + L+  +  AW  K
Sbjct: 583 ILQFNDGLKNLEIHVTKDTDTLDNEMRGAWPLK 615


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 500 MQRGNIRASIMEGDITQGAVFELLPFND 417
           + R  +   I+ G +T  A+F+L+ F D
Sbjct: 54  LTRNALLVLILLGALTYHAIFDLISFKD 81


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 500 MQRGNIRASIMEGDITQGAVFELLPFND 417
           + R  +   I+ G +T  A+F+L+ F D
Sbjct: 54  LTRNALLVLILLGALTYHAIFDLISFKD 81


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 325 PLKGLYPQASLTPLSRASNM 384
           P   +YP ++L PL+   N+
Sbjct: 348 PSHSIYPSSNLMPLNNIQNL 367


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 293 VTYNITLPVGNRVTSVVVGKNQTPLDVEKMYNMIT 189
           V Y I + +G    +V+ G   TP  +   + M+T
Sbjct: 82  VKYIILIDLGEVAVTVLAGILTTPFKLPYFWKMLT 116


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 448 GLSSSCYLSMTK*RLLS 398
           G+++SC L+  K RLL+
Sbjct: 92  GIANSCILNQDKWRLLN 108


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 64  LSGECFST*ARKTCWSR 114
           +SGE F +  + +CW++
Sbjct: 380 MSGESFKSPYKASCWAQ 396


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 64  LSGECFST*ARKTCWSR 114
           +SGE F +  + +CW++
Sbjct: 380 MSGESFKSPYKASCWAQ 396


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,461
Number of Sequences: 336
Number of extensions: 2657
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)