Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30327
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   0.53 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   3.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   4.9  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   8.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.6  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.6  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +3

Query: 381 ILFVDSLSNTIDFLVHFSTVMIT 449
           +LF+   ++T+ F+++ ST++IT
Sbjct: 346 VLFIQVAADTVLFILNISTIIIT 368


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 321 TDGRFPPLW 295
           T+GR PP+W
Sbjct: 216 TEGRLPPVW 224


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 96  YTQEGSYSRRSCGY 55
           Y Q  +Y   SCGY
Sbjct: 338 YDQSSAYDASSCGY 351


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
          5-like protein protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -1

Query: 69 RSCGYHNP 46
          ++CGYH+P
Sbjct: 37 KACGYHSP 44


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 417 NLSYWTRNPQKGWQSY 370
           N  +WT   QK W+ Y
Sbjct: 191 NAKHWTGIFQKKWRGY 206


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 330 IHYTDGRFPPLW*SKQRLCDDQGL 259
           IHY   + P  W   Q+  D QG+
Sbjct: 85  IHYLVKQKPEWWEQLQKKFDPQGI 108


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 468 SSCWSERLSS 439
           SSCWSE + S
Sbjct: 38  SSCWSEDMGS 47


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 324 NGFLRQIILSRCIVFNN 374
           N FLRQ+   RC  + N
Sbjct: 168 NVFLRQVFTCRCKDYKN 184


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 380 GKVIKNNASTEYDLSEKSI 324
           GKVIK+  +  Y+LS++ I
Sbjct: 86  GKVIKSFFNQGYELSKQEI 104


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 379 AKLLKTMHLLSMICL 335
           A ++ TMHLL ++C+
Sbjct: 271 AFIIFTMHLLFLLCI 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,620
Number of Sequences: 336
Number of extensions: 2615
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)