Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30326
(516 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 29 0.093
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 29 0.093
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 29 0.12
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 25 2.0
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 25 2.0
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 24 2.6
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 23 4.6
L76433-1|AAC27659.1| 392|Anopheles gambiae tryptophan oxygenase... 23 6.1
L76432-1|AAC27663.1| 392|Anopheles gambiae tryptophan oxygenase... 23 6.1
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 8.1
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 23 8.1
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 29.1 bits (62), Expect = 0.093
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 305 QGSLAETQERANKLQAQKADLENQL---RDTQDRLTQEEDARNQLFQAKKKLEQE 460
+ S+ E QER +L+ QK DL+ QL + T+ ++ ++E +L +++E
Sbjct: 639 ENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNVDEE 693
Score = 27.5 bits (58), Expect = 0.28
Identities = 10/47 (21%), Positives = 26/47 (55%)
Frame = +2
Query: 338 NKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKK 478
+K++ Q+ +EN +++ Q+R + + + L + K +Q +K+
Sbjct: 629 DKIRNQRGQIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKR 675
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 29.1 bits (62), Expect = 0.093
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 320 ETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVE 487
E + + K++ Q LE +L+ T EE + L ++ L+QEV GL+ +++
Sbjct: 446 EDKRKLTKVEGQIGQLERELQSTG----YEEGSMETLAGRRQALQQEVRGLRSELD 497
Score = 23.4 bits (48), Expect = 4.6
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 302 NQGSLAETQERANKLQAQKADLENQLRD-TQDRLTQEEDARNQLFQAKKKLEQEVSGLKK 478
N+ E + KLQ K + + L +EE+ ++ + KK +E + ++
Sbjct: 956 NKEDPQEAGRKLKKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVEDDKKKIQA 1015
Query: 479 DVEDLELSVQK 511
+ DL+ +K
Sbjct: 1016 IITDLDEEKKK 1026
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 28.7 bits (61), Expect = 0.12
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 323 TQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDL 493
TQ+R +LQ + +L + +RL + +Q Q KKL+QE+ ++ ++ L
Sbjct: 714 TQQRREQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQL 770
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 24.6 bits (51), Expect = 2.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +3
Query: 312 ALPRPRSALTSSRPRRLISRT---NSGTPKTASPRKRMP 419
A P P + SSR +S NSG P A+P R P
Sbjct: 87 AAPGPSALPLSSRKSPTVSSAAALNSGFPSIANPNPRSP 125
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 24.6 bits (51), Expect = 2.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +3
Query: 312 ALPRPRSALTSSRPRRLISRT---NSGTPKTASPRKRMP 419
A P P + SSR +S NSG P A+P R P
Sbjct: 87 AAPGPSALPLSSRKSPTVSSAAALNSGFPSIANPNPRSP 125
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 24.2 bits (50), Expect = 2.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 365 LENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDL 493
+ + + QDRL E + + Q+ + KK+E E + K E L
Sbjct: 406 VNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEKL 448
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.4 bits (48), Expect = 4.6
Identities = 10/54 (18%), Positives = 27/54 (50%)
Frame = +2
Query: 299 GNQGSLAETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQE 460
GN+ + + Q+R + + ++ + Q + Q + Q++ + Q Q ++ Q+
Sbjct: 167 GNRETARKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQ 220
>L76433-1|AAC27659.1| 392|Anopheles gambiae tryptophan oxygenase
protein.
Length = 392
Score = 23.0 bits (47), Expect = 6.1
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -3
Query: 514 GLLYGQFQVLDVLLEAR 464
G+LYG++ +LD +L A+
Sbjct: 24 GMLYGEYLMLDKVLSAQ 40
>L76432-1|AAC27663.1| 392|Anopheles gambiae tryptophan oxygenase
protein.
Length = 392
Score = 23.0 bits (47), Expect = 6.1
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -3
Query: 514 GLLYGQFQVLDVLLEAR 464
G+LYG++ +LD +L A+
Sbjct: 24 GMLYGEYLMLDKVLSAQ 40
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 22.6 bits (46), Expect = 8.1
Identities = 12/60 (20%), Positives = 29/60 (48%)
Frame = +2
Query: 320 ETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLEL 499
+ Q+R + + Q+ + Q + + + Q +NQ Q +++ +Q+ ++ E EL
Sbjct: 250 QQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQEL 309
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 22.6 bits (46), Expect = 8.1
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -2
Query: 128 PSATVSTRARCGVAGTCASCAGQLGEPISAPAASCTPYGTS 6
PSA ++ VA C+ CA Q + T YGT+
Sbjct: 126 PSAEMNWSIVLIVAAGCSICAAQTTVKRYPTGVNATRYGTT 166
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 366,955
Number of Sequences: 2352
Number of extensions: 5865
Number of successful extensions: 28
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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