Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30326
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22220.2 68418.m02588 E2F transcription factor-1 (E2F1) ident... 35 0.028
At5g22220.1 68418.m02587 E2F transcription factor-1 (E2F1) ident... 35 0.028
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 35 0.037
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 34 0.065
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 34 0.065
At4g11740.1 68417.m01872 ara4-interacting protein, putative (SAY... 33 0.086
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 33 0.086
At2g40800.1 68415.m05033 expressed protein 33 0.11
At2g37080.1 68415.m04550 myosin heavy chain-related low similari... 33 0.11
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 33 0.15
At4g02940.1 68417.m00401 oxidoreductase, 2OG-Fe(II) oxygenase fa... 32 0.20
At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identi... 32 0.26
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 32 0.26
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 31 0.35
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 31 0.46
At1g21810.1 68414.m02729 expressed protein 31 0.46
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 31 0.61
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 31 0.61
At3g56430.1 68416.m06276 expressed protein unknown protein At2g4... 31 0.61
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 30 0.80
At4g03180.1 68417.m00435 expressed protein 30 0.80
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 30 0.80
At5g41140.1 68418.m05001 expressed protein 29 1.4
At5g08120.1 68418.m00947 myosin heavy chain-related identical to... 29 1.4
At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2) (T... 29 1.9
At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 1.9
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 29 2.5
At5g16600.1 68418.m01943 myb family transcription factor (MYB43)... 29 2.5
At4g31570.1 68417.m04483 expressed protein 29 2.5
At4g18240.1 68417.m02709 starch synthase-related protein contain... 29 2.5
At3g28770.1 68416.m03591 expressed protein 29 2.5
At5g08440.1 68418.m00994 expressed protein 28 3.2
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 28 3.2
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 28 3.2
At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator... 28 3.2
At1g16970.1 68414.m02061 Ku70-like protein identical to Ku70-lik... 28 3.2
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 28 4.3
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 28 4.3
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 28 4.3
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 28 4.3
At1g67230.1 68414.m07652 expressed protein 28 4.3
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 28 4.3
At1g22275.1 68414.m02784 expressed protein 28 4.3
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 27 5.7
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 27 5.7
At3g56830.1 68416.m06320 expressed protein contains Pfam profile... 27 7.5
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 7.5
At1g56040.1 68414.m06434 U-box domain-containing protein contain... 27 7.5
At1g11690.1 68414.m01342 hypothetical protein 27 7.5
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont... 27 9.9
At5g52280.1 68418.m06488 protein transport protein-related low s... 27 9.9
At4g36060.2 68417.m05134 basic helix-loop-helix (bHLH) family pr... 27 9.9
At4g36060.1 68417.m05133 basic helix-loop-helix (bHLH) family pr... 27 9.9
At4g12740.1 68417.m02001 adenine-DNA glycosylase-related / MYH-r... 27 9.9
At4g03830.1 68417.m00534 myosin heavy chain-related 27 9.9
At4g02810.1 68417.m00381 expressed protein 27 9.9
At4g01170.1 68417.m00155 hypothetical protein 27 9.9
At3g58840.1 68416.m06558 expressed protein 27 9.9
At3g25440.1 68416.m03163 group II intron splicing factor CRS1-re... 27 9.9
At3g05830.1 68416.m00654 expressed protein 27 9.9
At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product... 27 9.9
At1g24260.2 68414.m03059 MADS-box protein (AGL9) strongly simila... 27 9.9
At1g24260.1 68414.m03058 MADS-box protein (AGL9) strongly simila... 27 9.9
>At5g22220.2 68418.m02588 E2F transcription factor-1 (E2F1)
identical to E2F transcription factor-1 E2F1
[Arabidopsis thaliana] gi|10443849|gb|AAG17608
Length = 469
Score = 35.1 bits (77), Expect = 0.028
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 SLAETQERANKLQAQKADLENQLRDTQDRLTQ-EEDARNQ 427
S+A Q+ L A++A L++Q+R++Q+RLT ED N+
Sbjct: 206 SIANLQDEVQNLAAEEARLDDQIRESQERLTSLSEDENNK 245
>At5g22220.1 68418.m02587 E2F transcription factor-1 (E2F1)
identical to E2F transcription factor-1 E2F1
[Arabidopsis thaliana] gi|10443849|gb|AAG17608
Length = 469
Score = 35.1 bits (77), Expect = 0.028
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 SLAETQERANKLQAQKADLENQLRDTQDRLTQ-EEDARNQ 427
S+A Q+ L A++A L++Q+R++Q+RLT ED N+
Sbjct: 206 SIANLQDEVQNLAAEEARLDDQIRESQERLTSLSEDENNK 245
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 34.7 bits (76), Expect = 0.037
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +2
Query: 305 QGSLAETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKL----EQEVSGL 472
QG ET+ + + +K L NQ+ D Q L ++E A N L Q K++ E+ + +
Sbjct: 236 QGQKNETEAELEREKQEKPALLNQINDVQKALLEQEAAYNTLSQEHKQINGLFEEREATI 295
Query: 473 KKDVED 490
KK +D
Sbjct: 296 KKLTDD 301
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 33.9 bits (74), Expect = 0.065
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 317 AETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQ 457
+ET+ + + +K++L NQ+ D Q L ++E A N L + K++ +
Sbjct: 1001 SETEAELEREKQEKSELSNQITDVQKALVEQEAAYNTLEEEHKQINE 1047
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 33.9 bits (74), Expect = 0.065
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +2
Query: 317 AETQERANKLQAQKADLENQLRDTQDRLTQE-EDARNQLFQAKKKLEQEVSGLKKDVEDL 493
A++QE LQ+ D++ QLRDTQ+ ++E D ++ L K +L K++ DL
Sbjct: 917 AKSQE-IEALQSVLTDIKLQLRDTQETKSKEISDLQSVLTDIKLQLRDTQETKSKEISDL 975
Query: 494 ELSVQ 508
+ ++Q
Sbjct: 976 QSALQ 980
>At4g11740.1 68417.m01872 ara4-interacting protein, putative (SAY1)
similar to Ara4-interacting protein [Arabidopsis
thaliana] GI:13160609; contains Pfam profiles PF00789:
UBX domain, PF02809: Ubiquitin interaction motif
Length = 564
Score = 33.5 bits (73), Expect = 0.086
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 320 ETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLE 496
+ E LQA + +RD + R +EE AR + +KK E+E ++ ++LE
Sbjct: 407 QDDEYVASLQADRDKEMKSIRDAEARQLEEETARKAFLEEEKKKEEEAQRKLEEEQELE 465
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 33.5 bits (73), Expect = 0.086
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +2
Query: 305 QGSLAETQERANKLQAQKAD-LENQLRDTQDRLTQ----EEDARNQLFQAKKKLEQEVSG 469
Q +LAE ++ +L + L++QLR +D ++ E A+NQLF+ + + ++E +G
Sbjct: 194 QRNLAEENQKTMELLKDREQALQDQLRQAKDSVSTMQKLHELAQNQLFELRAQSDEETAG 253
Query: 470 LKKDVEDLELSVQKS 514
+ +V L V+++
Sbjct: 254 KQSEVSLLMDEVERA 268
>At2g40800.1 68415.m05033 expressed protein
Length = 377
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 383 DTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKD 481
D DR+ +EEDA +L +A++K +E+ L+K+
Sbjct: 343 DNLDRIEEEEDAERELQEAERKHREEIEKLEKE 375
>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
to myosin heavy chain [Rana catesbeiana] GI:4249701
Length = 583
Score = 33.1 bits (72), Expect = 0.11
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Frame = +2
Query: 302 NQGSLAETQERANKLQAQKADLEN--QLR-DTQDRLTQEEDARNQLFQAKK---KLEQEV 463
+ +L+ T KL+AQ ++ EN LR + + L+ E R +LF AK+ + + V
Sbjct: 157 DSAALSSTMNEVQKLKAQLSESENVENLRMELNETLSLVEKLRGELFDAKEGEAQAHEIV 216
Query: 464 SGLKKDVEDLELSVQ 508
SG +K +E L+++
Sbjct: 217 SGTEKQLEIANLTLE 231
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 305 QGSLAETQERANKLQAQKADLENQLRDTQDRLTQ-EEDARNQLFQAKKKLEQEVSGLKKD 481
+ ++ E Q K KA LE ++ D L + E++ ++L A KKLE+EV ++
Sbjct: 694 EANIKELQPLQTKFTDMKAQLELKMYDMSLFLKRAEQNEHHKLGDAVKKLEEEVEEMRSQ 753
Query: 482 VEDLE 496
+++ E
Sbjct: 754 IKEKE 758
>At4g02940.1 68417.m00401 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to A. thaliana hypothetical
protein T13L16.2, GenBank accession number 2708738;
contains Pfam domain PF03171 2OG-Fe(II) oxygenase
superfamily
Length = 569
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +2
Query: 329 ERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVED 490
++A L+ +K + E + + T+EE+ + + F +K E +V+G +DVED
Sbjct: 123 KKAEDLKQKKTEEEAEEDLKEVVATEEEEVKKECFNGEKVTENDVNGDVEDVED 176
>At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identical
to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis
thaliana]
Length = 1505
Score = 31.9 bits (69), Expect = 0.26
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 299 GNQGSLAETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKK 478
G L LQA K LE Q+ + RL E+ R L +AKK QE + +
Sbjct: 871 GELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRIRTDLEEAKK---QESAKAQS 927
Query: 479 DVEDLELSVQKS 514
+E+L+L +++
Sbjct: 928 SLEELQLKCKET 939
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +2
Query: 320 ETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLEL 499
E QE K++++ L ++L +TQ L EDA + +L +E ++ E+ EL
Sbjct: 854 EEQEEIEKVKSEVDALTSKLAETQTALKLVEDALSTAEDNISRLTEENRNVQAAKENAEL 913
Query: 500 SVQKS 514
+QK+
Sbjct: 914 ELQKA 918
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +2
Query: 326 QERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVE 487
QER K ++ ++E ++R+ Q+R +EE A+ + + +KK +E+ K++ E
Sbjct: 581 QERQRK---EREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEE 631
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +2
Query: 326 QERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLE----QEVSGLKKDVEDL 493
+ER K ++ ++E + R+ Q+R +EE+AR + + K++ E +E +K+ E++
Sbjct: 535 EERQRK---EREEVERKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEV 591
Query: 494 ELSVQK 511
E +++
Sbjct: 592 ERKIRE 597
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +2
Query: 320 ETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLE 496
E + R + +K E + R ++ +EE+ + + +KK E+E +K E+ E
Sbjct: 466 EAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEERE 524
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 31.1 bits (67), Expect = 0.46
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +2
Query: 332 RANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLELSVQK 511
+ ++++ +L+ + + ++ EED L Q K L++E+ LKK+ + L L ++
Sbjct: 694 KTSQMERMLENLDEKSNEIDNQKRHEEDVTANLNQEIKILKEEIENLKKNQDSLMLQAEQ 753
Query: 512 S 514
+
Sbjct: 754 A 754
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 320 ETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLE 496
ET+ R N+LQ + D L +T++ L E+D L +K ++ S L V+DLE
Sbjct: 358 ETKTR-NRLQFEGRDPWVLLEETREELDYEKDRNFNLRLQLEKTQESNSELILAVQDLE 415
>At1g21810.1 68414.m02729 expressed protein
Length = 628
Score = 31.1 bits (67), Expect = 0.46
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Frame = +2
Query: 329 ERANKLQAQKADLENQL---RDTQDRLTQEEDA----RNQLFQAKKKLEQEVSGLKKDVE 487
E+ K+QA+K DLE ++ R+ + RL+ E +A + +L K++E E + LK +
Sbjct: 274 EKLEKIQAEKDDLEREVKCCREAEKRLSLEIEAVVGDKMELEDMLKRVEAEKAELKTSFD 333
Query: 488 DLELSVQKS 514
L+ Q+S
Sbjct: 334 VLKDKYQES 342
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 344 LQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLEL 499
++ QK +LE + + ++ L R + F+ +KKLE+E K++ + EL
Sbjct: 648 IEMQKRELEYCIENKREELENSSRDREKAFEQEKKLEEERIQSLKEMAEKEL 699
>At5g48600.1 68418.m06011 structural maintenance of chromosomes (SMC)
family protein similar to SP|P50532 Chromosome assembly
protein XCAP-C {Xenopus laevis}; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 30.7 bits (66), Expect = 0.61
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +2
Query: 329 ERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKK---LEQEVSGLKKDVEDLEL 499
E + L K+D EN + + DA ++ KKK LE G KK + DL++
Sbjct: 927 EHKDVLTGAKSDYENLKKSVDELKASRVDAEFKVQDMKKKYNELEMREKGYKKKLNDLQI 986
Query: 500 SVQK 511
+ K
Sbjct: 987 AFTK 990
>At3g56430.1 68416.m06276 expressed protein unknown protein
At2g40800 - Arabidopsis thaliana, EMBL:AC007660
Length = 434
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 383 DTQDRLTQEEDARNQLFQAKKKLEQEV---SGLKKDVEDLEL 499
D DR+ +EEDA +L +A++K +E+ +K+ E+ EL
Sbjct: 377 DNLDRIEEEEDAERELQEAERKEREEIELQEAERKEREEFEL 418
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 30.3 bits (65), Expect = 0.80
Identities = 16/65 (24%), Positives = 36/65 (55%)
Frame = +2
Query: 299 GNQGSLAETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKK 478
GN S ET++ ++K +++K + N+ +T++ ++E ++ L + Q+V +
Sbjct: 456 GNDTSNKETEDDSSKTESEKKEENNRNGETEETQNEQEQTKSAL---EISHTQDVKDART 512
Query: 479 DVEDL 493
D+E L
Sbjct: 513 DLETL 517
>At4g03180.1 68417.m00435 expressed protein
Length = 185
Score = 30.3 bits (65), Expect = 0.80
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +2
Query: 362 DLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVE 487
DL Q R+ +R+ +E +A +FQAKK+ ++E +K+ +
Sbjct: 112 DLYKQTREEMERVRKEREA---MFQAKKEAKEEAESRRKEAK 150
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 30.3 bits (65), Expect = 0.80
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 341 KLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQ 457
+L++ K LEN+ + D + + E+A+ L KKKLE+
Sbjct: 989 ELESVKVTLENEKQRADDAVRKFEEAQESLEDKKKKLEE 1027
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 338 NKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLE 496
NKLQ + D L +T++ L E+D + L +K ++ + L V+DLE
Sbjct: 365 NKLQLEGRDPHVLLEETREELDYEKDLNSNLRLQLQKTQESNTELILAVQDLE 417
>At5g08120.1 68418.m00947 myosin heavy chain-related identical to
myosin heavy chain-like protein GI:1732515 from
[Arabidopsis thaliana]
Length = 326
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +2
Query: 326 QERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLE 454
+E ++L+ Q DL+ +L + ++ L E ++NQ+ + ++KLE
Sbjct: 136 KEEMSRLREQVNDLQTKLSEKEEVLKSMEMSKNQVNEIQEKLE 178
>At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2)
(TITAN3) very strong similarity to SMC2-like condensin
(TITAN3) [Arabidopsis thaliana] GI:14279543; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1175
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Frame = +2
Query: 299 GNQGSLAETQERANKLQAQK-------ADLENQLRDTQDRLTQ-EEDARNQLFQAKKKLE 454
G+Q LA+ + + +LQ + A LE + D L + E++ ++L +A KKLE
Sbjct: 688 GHQKRLADVESQIKELQPLQMKFTDVYAQLELKTYDLSLFLKRAEQNEHHKLGEAVKKLE 747
Query: 455 QEVSGLKKDVEDLELS 502
+E+ K +++ EL+
Sbjct: 748 EELEEAKSQIKEKELA 763
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 326 QERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKK---LEQEVSGLKKDVEDLE 496
+++ +L+ Q+ + + ++ +D T+ E R +L + K LE+E+S K+ +EDL
Sbjct: 360 EKQLEELEEQRKSVLSYMQSLRDAHTEVESERVKLRVVEAKNFALEREISVQKELLEDLR 419
Query: 497 LSVQK 511
+QK
Sbjct: 420 EELQK 424
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 341 KLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLELSV 505
+L+ + NQ+ +TQ RL + E+ + +A+ K+ +E L V+ LE V
Sbjct: 169 ELEMELVKKTNQVSETQMRLKRLEEETEKRAKAEMKIVKEKEALWNKVQKLEAGV 223
>At5g16600.1 68418.m01943 myb family transcription factor (MYB43)
contains PFAM profile: myb DNA binding domain PF00249
Length = 327
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 326 QERANKLQAQKADL--ENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSG 469
QE + + Q +K L + QD+ T++E ++QL QA +K VSG
Sbjct: 132 QEASQQAQGRKKSLVPHDDKNPKQDQQTKDEQEQHQLEQALEKNNTSVSG 181
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 305 QGSLAETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDV 484
Q S +E QE+ L A + ++ L +EE L +LEQEV D+
Sbjct: 2358 QASHSELQEKVTSLSDLLAAKDLEIEALMQALDEEESQMEDLKLRVTELEQEVQQKNLDL 2417
Query: 485 EDLELS 502
+ E S
Sbjct: 2418 QKAEAS 2423
>At4g18240.1 68417.m02709 starch synthase-related protein contains
similarity to starch synthase GI:4582783 from [Vigna
unguiculata]
Length = 1040
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 365 LEN-QLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLELSVQKS 514
LEN LR+ + L E D+ + LE+E SGL+ V+DLE + S
Sbjct: 287 LENLSLRNDIEMLKSELDSVKDTGERVVVLEKECSGLESSVKDLESKLSVS 337
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/59 (22%), Positives = 31/59 (52%)
Frame = +2
Query: 320 ETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLE 496
E +E K K + + + + +QD+ +E+D+ + + +K+ +++ KK+ E E
Sbjct: 1011 EKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKE 1069
>At5g08440.1 68418.m00994 expressed protein
Length = 726
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +2
Query: 302 NQGSLAETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKD 481
N A QE +K+Q Q ++ + D T+E RN+ + +K++ S +
Sbjct: 209 NNSGTAWKQELIHKVQEQDQEILRLRKYLADYSTKEVQIRNEKYVLEKRIAHMRSAFDQQ 268
Query: 482 VEDLELSVQKS 514
+DL + K+
Sbjct: 269 QQDLVDAASKA 279
>At3g54670.1 68416.m06049 structural maintenance of chromosomes (SMC)
family protein similar to SMC1 protein [Bos taurus]
GI:4235253, 14S cohesin SMC1 subunit (SMC protein)
[Xenopus laevis] GI:3328231; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 320 ETQ-ERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLE 496
ETQ + A K ++ +L NQL + +L E++ + +K+E +S L+ D+E ++
Sbjct: 820 ETQLKTAEKEAEERLELSNQLAKLKYQLEYEQN--RDVGSRIRKIESSISSLETDLEGIQ 877
Query: 497 LSVQK 511
++ +
Sbjct: 878 KTMSE 882
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 317 AETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEV----SGLKKDV 484
A +ER N +++LEN+L++ +R + A +L Q K EQ+ + ++
Sbjct: 538 ALAEERTNN--EARSELENRLKEAGERESMLVQALEELRQTLSKKEQQAVYREDMFRGEI 595
Query: 485 EDLELSVQKS 514
EDL+ Q S
Sbjct: 596 EDLQRRYQAS 605
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = +2
Query: 314 LAETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDL 493
+AE +E + K AQ+A Q+R + ++ + E+ + L + E +V +K+D
Sbjct: 449 MAEGEELSKKQAAQEA----QIRKLRAQIREAEEEKKGLITKLQSEENKVESIKRDKTAT 504
Query: 494 ELSVQKS 514
E +Q++
Sbjct: 505 EKLLQET 511
>At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator of
chromosome condensation (RCC1) family protein identical
to zinc finger protein PRAF1 [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.
Length = 1103
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 341 KLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDL 493
K + Q+ +L+N ++ TQ+ L E+ + AK+ ++ ++ LK E L
Sbjct: 855 KCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEKL 905
>At1g16970.1 68414.m02061 Ku70-like protein identical to Ku70-like
protein GI:12006424 from [Arabidopsis thaliana];
contains Pfam profiles PF03731: Ku70/Ku80 N-terminal
alpha/beta domain, PF02735: Ku70/Ku80 beta-barrel
domain, PF03730: Ku70/Ku80 C-terminal arm, and PF02037:
SAP domain; contains TIGRfam profile TIGR00578:
ATP-dependent DNA helicase ii, 70 kDa subunit
Length = 621
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 344 LQAQKADLENQLRDTQDRLTQEEDARNQ--LFQAKKKLEQEVSGLKKDVEDLELSVQKS 514
LQA D EN+LR+T+D +E+ N+ + +A ++ +Q + G D E + +KS
Sbjct: 504 LQAIALD-ENELRETRDETLPDEEGMNRPAVVKAIEQFKQSIYGDDPDEESDSGAKEKS 561
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 27.9 bits (59), Expect = 4.3
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 314 LAETQERANKLQ-AQKADLEN---QLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKD 481
L E E ANKL+ + LE+ QL + D+L E L + LE V+ K
Sbjct: 329 LEEQLEEANKLERSASVSLESVMKQLEGSNDKLHDTETEITDLKERIVTLETTVA---KQ 385
Query: 482 VEDLELSVQK 511
EDLE+S Q+
Sbjct: 386 KEDLEVSEQR 395
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 332 RANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQE 460
+A K +A+K +N + +D+L E+ A L K+K+E+E
Sbjct: 58 KAQKARAKKKTNDNLKKAKRDKLDPEKSALTTLDLLKEKIEKE 100
>At4g14760.1 68417.m02271 M protein repeat-containing protein
contains Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 332 RANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLELSVQK 511
R NK + LE +RD ++ + D Q K L+QE+ L + EDL + Q+
Sbjct: 259 RYNKSLELISSLEKTIRDAEESVRVFRDQSEQAETEIKALKQELLKLNEVNEDLNVRYQQ 318
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 LAETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQ-EVSGLKKDVED 490
+AE+ L+ Q DLE ++ + +L +EE + + Q +++E+ +S +K+ + +
Sbjct: 1270 VAESTGTILSLKQQVQDLEATCKEFRSKLLEEEKNASAMEQKLEEIEETSISAMKEKLSE 1329
Query: 491 LE 496
L+
Sbjct: 1330 LK 1331
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/64 (20%), Positives = 33/64 (51%)
Frame = +2
Query: 320 ETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLEL 499
E ++ + + + ++ D Q+ + E + ++ +K LE++ + ++KDV+DL
Sbjct: 643 EREKELSNINYLRDVARREMMDMQNERQRIEKEKLEVDSSKNHLEEQQTEIRKDVDDLVA 702
Query: 500 SVQK 511
+K
Sbjct: 703 LTKK 706
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 344 LQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDL 493
+ + + + E R T D + +D R + KKKLE+E+ L K++E+L
Sbjct: 261 VSSSEKEYEQISRRTDDIKLELDDERRE----KKKLEEELMELNKELEEL 306
>At1g22275.1 68414.m02784 expressed protein
Length = 856
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 320 ETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDL 493
ET KL+ +K L +QL LT +ED L ++KLE+E + ++ ++L
Sbjct: 217 ETTAAERKLKIEK--LNSQLEKLHLELTTKEDEVIHLVSIQEKLEKEKTNVQLSSDEL 272
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 329 ERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLE 496
E N+L+ LE + + + + + E +L + +K E+E+ G+KK+ LE
Sbjct: 187 EEVNRLKECVVRLEEKESNLEIVIGKLESENERLVKERKVREEEIEGVKKEKIGLE 242
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 SLAETQERANKLQAQKADLENQLRDTQDRLTQ-EEDARNQ 427
S+ + Q L ++ L+NQ+R T++RL E+ +NQ
Sbjct: 245 SVLQLQAEIENLALEEQALDNQIRQTEERLRDLSENEKNQ 284
>At3g56830.1 68416.m06320 expressed protein contains Pfam profile
PF04483: Protein of unknown function (DUF565)
Length = 230
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 129 TFCHSFHQGQVRSCRYLRKLRWTTWRANL 43
+ CH H Q R+ R++ WTT ++++
Sbjct: 34 SLCHFLHPAQPLLVRHQRRMSWTTIKSSV 62
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Frame = +2
Query: 305 QGSLAETQERANKLQAQKADLENQL-------RDTQDRLTQEEDARNQLFQAKKKL---E 454
Q L+E +E+A +Q ++ + E + + QD ++++ + + + K L E
Sbjct: 442 QRVLSELEEKAGFIQEERGEYERVVEAYCLVNQKLQDSVSEQSNMEKFIMELKADLRRRE 501
Query: 455 QEVSGLKKDVEDLELSV 505
+E + L+KD+ DL+ V
Sbjct: 502 RENTLLQKDISDLQKQV 518
>At1g56040.1 68414.m06434 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 437
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +2
Query: 314 LAETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVS--GLKKDVE 487
LA ++R K++ Q +EN++ +T RL EE R + + E E++ KK++E
Sbjct: 211 LAIERDRIEKVKIQLETVENEIDNT--RLKAEEFERKYEGEMILRRESEIALEKEKKELE 268
Query: 488 DLELSVQ 508
+++L ++
Sbjct: 269 EVKLKLE 275
>At1g11690.1 68414.m01342 hypothetical protein
Length = 247
Score = 27.1 bits (57), Expect = 7.5
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 12/81 (14%)
Frame = +2
Query: 305 QGSLAETQERANKLQAQKADLENQLRDT-QDRLTQEEDARNQLF-----------QAKKK 448
Q L + Q R +L+A+K E +R +++ ++E+ N + KK+
Sbjct: 39 QTELWKAQTRIKELEAEKFKSEETIRCLIRNQRNEKEETTNPFVDYLKEKLSKEREEKKR 98
Query: 449 LEQEVSGLKKDVEDLELSVQK 511
++ E S LKK + D+E SV +
Sbjct: 99 VKAENSRLKKKILDMESSVNR 119
>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
contains weak similarity to cytoplasmic linker protein
CLIP-170 (GI:2905649) [Gallus gallus]
Length = 588
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 338 NKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLELSVQKS 514
NKLQ ADLEN + L E R ++++EVS L+ +VE L +++ S
Sbjct: 311 NKLQNNPADLENH----EILLKDYESLRRG---ESNEMDEEVSSLRCEVERLRAALEAS 362
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 362 DLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVED 490
+L++Q+ + +L Q+ ++ +LE +V LKK++ED
Sbjct: 497 ELKSQIEILEGKLKQQSLEYSECLITVNELESQVKELKKELED 539
>At4g36060.2 68417.m05134 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 268
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 371 NQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLELSVQ 508
++L+ + L+QE +L Q K +L +E + LK D+E L Q
Sbjct: 81 DRLKAEYETLSQES---RELIQEKSELREEKATLKSDIEILNAQYQ 123
>At4g36060.1 68417.m05133 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 286
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 371 NQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLELSVQ 508
++L+ + L+QE +L Q K +L +E + LK D+E L Q
Sbjct: 99 DRLKAEYETLSQES---RELIQEKSELREEKATLKSDIEILNAQYQ 141
>At4g12740.1 68417.m02001 adenine-DNA glycosylase-related /
MYH-related similar to MYH (GI:18845094) [Rattus
norvegicus]; similar to adenine-DNA glycosylase
(GI:12656850) [Mus musculus]; contains TIGRFAM profile
TIGR01084: A/G-specific adenine glycosylase (hits below
the trusted cutoff)
Length = 630
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +2
Query: 329 ERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDL 493
ER + +A++ + + D+ EE++ + + +++ E E L D+EDL
Sbjct: 68 EREAEREAEEEEKAEEAEAEADKEEAEEESEEEEEEEEEEAEAEEEALGGDIEDL 122
>At4g03830.1 68417.m00534 myosin heavy chain-related
Length = 578
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 311 SLAETQERAN-KLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKD 481
SL+ + RA+ K + DL + R+ EE+ ++A+KK+E+E + +KD
Sbjct: 216 SLSSDRVRASGKRLRSRTDLAISSPPFEPRIFSEEEMSAPSYRAEKKMERERAKQEKD 273
>At4g02810.1 68417.m00381 expressed protein
Length = 271
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 338 NKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLE 496
N L +Q A+ E + D D+ EE+ + + +++ E+E +++ ED E
Sbjct: 171 NSLNSQDAEEEFEEEDEDDQYDAEEEEEEEEEEEEEEEEEEEEEEEEEEEDEE 223
>At4g01170.1 68417.m00155 hypothetical protein
Length = 444
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +2
Query: 320 ETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVEDLE 496
+ Q+R KL KA+ E RD + +ED++ + +E+ K+ V +++
Sbjct: 139 DIQQRVRKLSDSKAETETLRRDDVPLVGSQEDSQRDNTVPLVRTAEEIQLAKRVVAEID 197
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/64 (17%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Frame = +2
Query: 326 QERANKLQAQKADLENQLRDTQDRL----TQEEDARNQLFQAKKKLEQEVSGLKKDVEDL 493
++ A L+ +A++E ++RD + ++ +E + +++ ++++++ + K+++E+L
Sbjct: 141 EKEAEGLRKDRAEVEKRVRDLERKIGVLEVREMEEKSKKLRSEEEMREIDDEKKREIEEL 200
Query: 494 ELSV 505
+ +V
Sbjct: 201 QKTV 204
>At3g25440.1 68416.m03163 group II intron splicing factor
CRS1-related contains weak similarity to CRS1 [Zea mays]
gi|9837550|gb|AAG00595
Length = 380
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 392 DRLTQEEDARNQLFQAKKKLEQEVSGLKK 478
+R+T EE N+L +A+KK E+ + +KK
Sbjct: 69 ERMTSEEKILNKLRKARKKEERLMETMKK 97
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +2
Query: 311 SLAETQERANKLQAQKADLENQLRDTQDRLTQEEDARNQLFQAKKKLEQEVSGLKKDVED 490
S T+ + + L+ Q D LR+ +DR+TQ + L + E L+++V
Sbjct: 117 SAQSTKIQCSMLKQQLDDKTRSLREQEDRMTQLGHQLDDLQRGLSLRECSEKQLREEVRR 176
Query: 491 LELSVQKS 514
+E V ++
Sbjct: 177 IEREVTEA 184
>At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product
[Arabidopsis thaliana] GI:871782
Length = 748
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 300 ETRAALPRPRSALTSSRPRRLI--SRTNSGTPKTASPRKR 413
ETR P RSA+ +RPR I S P+T R R
Sbjct: 255 ETRPRTPEHRSAIPDTRPRTPIHESAATGRRPQTPETRPR 294
>At1g24260.2 68414.m03059 MADS-box protein (AGL9) strongly similar
to GB:O22456, MADS-box protein, Location of EST
gb|H37053
Length = 251
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 11 SRKEYKKLQEQRLALQVVQRNL 76
S++EY KL+E+ ALQ QRNL
Sbjct: 94 SQQEYLKLKERYDALQRTQRNL 115
>At1g24260.1 68414.m03058 MADS-box protein (AGL9) strongly similar
to GB:O22456, MADS-box protein, Location of EST
gb|H37053
Length = 250
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 11 SRKEYKKLQEQRLALQVVQRNL 76
S++EY KL+E+ ALQ QRNL
Sbjct: 93 SQQEYLKLKERYDALQRTQRNL 114
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,900,793
Number of Sequences: 28952
Number of extensions: 110709
Number of successful extensions: 713
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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