Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30318
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.5  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 484 VKLSYLLHTCSLAEWFAPPSDIYKVFYFQHLI 389
           V ++ ++ T +L   +   S +YKVF  +HL+
Sbjct: 167 VVMTSVIMTLALGNPYCFNSSVYKVFPVEHLL 198


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 121  DGKWLPSFIDIS 156
            DGK+LPS ID S
Sbjct: 2337 DGKYLPSDIDPS 2348


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 391 LDVGSRKLCIYPMVEQTIRPTSMY 462
           +D+ S K C Y      I P+S+Y
Sbjct: 1   MDIKSIKTCFYVAKFFAITPSSIY 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,478
Number of Sequences: 336
Number of extensions: 2082
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)