Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30318
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79753-6|CAI91165.1|  218|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z79753-5|CAE17798.1|  170|Caenorhabditis elegans Hypothetical pr...    28   3.4  

>Z79753-6|CAI91165.1|  218|Caenorhabditis elegans Hypothetical
           protein F20G2.6b protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 210 QSTIITNECIIIYNNINFRSAFRLNNN 290
           QS+I  N+  I  NN N  S+F  NNN
Sbjct: 93  QSSIANNDTEISCNNFNSNSSFNRNNN 119


>Z79753-5|CAE17798.1|  170|Caenorhabditis elegans Hypothetical
           protein F20G2.6a protein.
          Length = 170

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 210 QSTIITNECIIIYNNINFRSAFRLNNN 290
           QS+I  N+  I  NN N  S+F  NNN
Sbjct: 45  QSSIANNDTEISCNNFNSNSSFNRNNN 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,349,331
Number of Sequences: 27780
Number of extensions: 183578
Number of successful extensions: 371
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)