Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30316
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.6  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   1.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.7  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   6.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.6  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.6  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.6  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -1

Query: 291 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 181
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -1

Query: 291 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 181
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 382 QTRRNPEWRMRTT 344
           QTRRNP +R RT+
Sbjct: 226 QTRRNPYYRPRTS 238


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 351 EQLLLEGGVPGIAD 310
           EQ+L EGG P + D
Sbjct: 837 EQILAEGGCPNLYD 850


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +2

Query: 131 PPIHRWYLLSLHSSLQCGPSRPHRSLRTLTLLPNSLVLVQRQWE*LVP 274
           P + R  L  L S L  G   P   +    + PN+++L       LVP
Sbjct: 129 PVVKRRLLQHLASCLNQGQKEPQVQVIVPEVAPNNIILGNGTGVQLVP 176


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 144 LCMGGYCCKWSHQ 106
           L +GG  C WS Q
Sbjct: 504 LVLGGEVCLWSEQ 516


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -2

Query: 233 NLAAESMSLVTDVVWKDRTA 174
           +L+   ++++TD++WK   A
Sbjct: 70  DLSVGLINVLTDIIWKTTVA 89


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 269 VPELVLEQSSAPSSSAMPGTP 331
           VP+ V E +  PSS+  P  P
Sbjct: 393 VPQPVEEVTQKPSSTKAPAPP 413


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,278
Number of Sequences: 336
Number of extensions: 2785
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)